Awesome Open Source

Programming Languages

Search results for image registration

image-registration x

82 search results found

Voxelmorph ⭐ 2,025

Unsupervised Learning for Image Registration

Advanced Normalization Tools (ANTs)

Awesome Image Registration ⭐ 971

image registration related books, papers, videos, and toolboxes

Simpleelastix ⭐ 474

Multi-lingual medical image registration library

Deepreg ⭐ 442

Medical image registration using deep learning

Cnn Registration ⭐ 376

An image registration method using convolutional neural network features.

Transmorph_transformer_for_medical_image_registration ⭐ 302

TransMorph: Transformer for Unsupervised Medical Image Registration (PyTorch)

Image registration laboratory for 2D and 3D image data

Vit V Net_for_3d_image_registration_pytorch ⭐ 185

Vision Transformer for 3D medical image registration (Pytorch).

Nonrigid image registration using multi-scale 3D convolutional neural networks

The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core libraries, and basic command-line tools. Extension packages are hosted by the MIRTK GitHub group at

Smriprep ⭐ 111

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

Modular Tracking Framework

Image-and-Spatial Transformer Networks

Quicksilver ⭐ 84

Predictive Image Registration

Flexible Algorithms for Image Registration

Awesome Computational Photography ⭐ 73

A curated list of awesome resources for topics related to computational photography via deep learning, which mainly focuses on image alignment and stitching.

BIRL: Benchmark on Image Registration methods with Landmark validations

Superelastix ⭐ 58

Official SuperElastix repository

Image Registration Cnn ⭐ 51

A pytorch implementation of CNN based MRI image registration based on Christodoulidis Stergios et al. "Linear and Deformable Image Registration with 3D Convolutional Neural Networks", 2018.

2d_aldic ⭐ 42

AL-DIC(Augmented Lagrangian DIC) is a fast, parallel-computing DIC algorithm, which combines advantages of Local Subset DIC (fast, compute in parallel) and Global DIC (guarantee kinematic compatibility).

Rniftyreg ⭐ 39

An R interface to the NiftyReg medical image registration library

Itktubetk ⭐ 39

TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.

Nightlight ⭐ 35

Nightlight: Astronomic Image Processing

Biomedical Visualization and Analysis Framework

Python FE-DIC library

Voxelmorph Pytorch ⭐ 31

An unofficial PyTorch implementation of VoxelMorph- An unsupervised 3D deformable image registration method

NeSVoR is a package for GPU-accelerated slice-to-volume reconstruction.

Multi-modal Image Registration And Connectivity anaLysis

Imregpoc ⭐ 28

FFT based image registration tool for Python and MATLAB

Deepatlas ⭐ 27

Joint Semi-supervised Learning of Image Registration and Segmentation

FFT based image registration. Forked from https://pypi.org/project/imreg

Dataset Histology Landmarks ⭐ 24

Dataset: landmarks for registration of histology images

Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)

Gdl Fire 4d ⭐ 20

General deep learning-based fast image registration framework for clinical thoracic 4D CT data

Joint Motion Estimation And Segmentation ⭐ 20

[MICCAI'18] Joint Learning of Motion Estimation and Segmentation for Cardiac MR Image Sequences

Matlab_elastix ⭐ 19

MATLAB Elastix wrapper

Efficient dense deformable image registration

Acrn_chest_x Ray_ia ⭐ 19

Learning Deformable Registration of Medical Images with Anatomical Constraints

Non-linear warps between common rhesus macaque brain templates

Image, point set, and surface registration in PyTorch.

Magellanmapper ⭐ 18

MagellanMapper is a graphical interface for 3D bioimage annotation, atlas registration, and regional quantification

Image Restoration ⭐ 17

Image registration using pytorch

Imageregistration ⭐ 17

Medical Image Registration using Mutual Information

Group-wise diffeomorphic registration and segmentation of medical images.

TextSCF: LLM-Enhanced Image Registration Model

Sitk Ibex ⭐ 16

Aligning images acquired with the IBEX microscopy imaging technique

Registration Nice Net ⭐ 15

[MICCAI2022] NICE-Net: a Non-Iterative Coarse-to-finE registration Network for deformable image registration.

Fourier Analysis Digital Images ⭐ 15

Fourier analysis applications for image matching.

[CVPR2020] Unsupervised Multi-Modal Image Registration via Geometry Preserving Image-to-Image Translation

Vessel Segmentation Mr Registration ⭐ 14

The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.

Biomechanics Informed Motion Tracking ⭐ 13

[MICCAI'20] Biomechanics-informed Neural Networks for Myocardial Motion Tracking in MRI

SASHIMI segmentation is a Matlab App for semi-automatic interactive segmentation of multi-slice images.

Shenanigans ⭐ 13

Semi-random funky stuff, mainly for my PhD experiments and articles. Contains calculations and algorithm implementations for various applied mathematics and astrophysics articles I worked on.

Lagomorph ⭐ 13

Image Registration and Computational Anatomy in PyTorch

St_gridnet ⭐ 12

A Python implementation of the model described in our publication "A convolutional neural network for common-coordinate registration of high-resolution histology images" developed principally for applications to registration of spatial transcriptomics image data.

Deepaerialmatching_pytorch ⭐ 12

Official Implementation of Deep Aerial Image Matching using PyTorch

Gsi Rads ⭐ 12

Glioblastoma Surgery Imaging - Reporting And Data System (GSI-RADS).

Registration Aan ⭐ 11

AAN: Appearance Adjustment Networks to enhance deep learning-based image registration.

Imageprocessing And Computervision ⭐ 11

Repository for exercises and project in Image Processing and Computer Vision course at University of Twente

Atlas Alignment ⭐ 10

Blue Brain multi-modal registration and alignment toolbox

Deephistreg ⭐ 9

Code used to create the DeepHistReg submission to the ANHIR challenge.

Software used by the AGH team during the ANHIR challenge.

On The Fly Guidance ⭐ 8

On-the-Fly Guidance Training for Medical Image Registration. Pre-print available in link below.

Spac Deformable Registration ⭐ 8

Reinforcement learning for deformable image registration, AAAI 2022

Elastix Py ⭐ 8

A Python wrapper for the Elastix image registration software package.

Fully_unsupervised_cnn_registration_keras ⭐ 8

Fully unsupervised 2D/3D image registration with ConvNet.

Geodesic Shooting ⭐ 7

Geodesic shooting and landmark matching in Python.

Leem Analysis ⭐ 7

Quantitative Data Analysis for spectroscopic LEEM

Ap Image Register ⭐ 7

C++ class for 2D multimodal image registration

DRMIME - Differentiable Mutual Information and Matrix Exponential for Multi-Resolution Image Registration

selected code for 3D-2D image registration using deep learning

Image Registration ⭐ 6

Java API to perform for image registration using control points (landmarks). Supports rigid transforms and affine transforms. Decouples matrix computation from API, so use of different Java matrix computation libraries is possible.

Freeformdeformation Sketchdetection ⭐ 6

Real-time image warping based on cubic B-spline Free Form Deformation (FFD) & sketch generation based on edge detection

3D image registration training framework using adaptive loss weighting and synthetic data generation

Mutlimodal Imge Registration ⭐ 5

Multimodal image image registration main functions such as mutual information (MI), histogram segmentation, rigid transformation, and RMSE

SymTrans: A symmetric Transformer-based model for image registration.

Difference of Local Entropy (DoLE) variant of SIFT for multimodal key point detection/description.

Fastlocalcorrelationcoefficients.jl ⭐ 5

Fast computation of local (Pearson) correlation coefficients for arbitrary size tensors of real and complex numbers.

ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing

Medical Image Registration And Pre Processing ⭐ 5

Register images to MNI152 Template and perform pre-processing

1-82 of 82 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.