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Search results for image analysis microscopy

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13 search results found

Tools for computational pathology

cuCIM - RAPIDS GPU-accelerated image processing library

Cellfinder ⭐ 170

Automated 3D cell detection in very large images

Collection of tools and scripts useful to automate microscopy workflows in ZEN Blue using Python and Open Application Development tools and AI tools.

Awesome Biological Image Analysis ⭐ 74

A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.

Lattice light-sheet post-processing utility.

Cellfinder Core ⭐ 19

Standalone cellfinder cell detection algorithm

🔬🍸 Home of the ImageJ BAR: A collection of Broadly Applicable Routines for ImageJ

Amfinder ⭐ 14

The Automatic Mycorrhiza Finder (AMFinder) allows for automatic computer vision-based identification and quantification of AM fungal colonisation and intraradical hyphal structures on ink-stained root images using convolutional neural networks.

Visualisation and analysis of brain imaging data

ExTrack MLE for diffusive noisy single-particle tracks

Ps_decomp ⭐ 8

Periodic plus smooth image decomposition, as described by Moisan (http://www.math-info.univ-paris5.fr/~moisan/paper

A .NET library for working with scientific image data in TIFF files

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Python Image Analysis (236)

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