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Search results for groovy bioinformatics
bioinformatics
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groovy
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20 search results found
Nextflow
⭐
2,447
A DSL for data-driven computational pipelines
Bpipe
⭐
220
Bpipe - a tool for running and managing bioinformatics pipelines
P2rank
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193
P2Rank: Protein-ligand binding site prediction tool based on machine learning. Stand-alone command line program / Java library for predicting ligand binding pockets from protein structure.
Vdjdb Db
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122
🗂️ [vdjdb.cdr3.net is down for maintenance] Git-based TCR database storage & management. Submissions welcome!
Vdjtools
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113
Post-analysis of immune repertoire sequencing data
Cytomine Core
⭐
73
Cytomine-Core is the main web server implementing the Cytomine API
Asap
⭐
46
A scalable bacterial genome assembly, annotation and analysis pipeline
Migec
⭐
40
A RepSeq processing swiss-knife
Migmap
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38
HTS-compatible wrapper for IgBlast V-(D)-J mapping tool
Bionextflow
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22
A collection of modules and sub-workflows for Nextflow
Bactpipe
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17
BACTpipe: An assembly and annotation pipeline for bacterial genomics
Cytomine Ims
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13
Cytomine-IMS: Image Management System
Bacting
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11
Bacting := acting as the Bioclipse TNG
Rnaseq
⭐
8
Fast RNAseq pipeline
Cytomine Tools
⭐
8
Cytomine toolbox
Nf Tenx
⭐
7
All 10x Genomics processing pipelines rolled into one containerized pipelines
Cytomine Software Router
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7
Cytomine module for communication between Cytomine-Core and remote algorithms
Configbuilder Nf
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6
Nextflow config builder scripts for supported HPC infrastructures.
Cytomine Dotslidetools
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5
dotslide2tiff tools
Bulkrna
⭐
5
Dalmolin Group's workflow for pre-processing, alignment and quantification of bulk RNA-seq data
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1-20 of 20 search results
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