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7 search results found

AStarix: Fast and Optimal Sequence-to-Graph Aligner

Graph Sequencer ⭐ 18

Sort items in a graph using a topological sort while resolving cycles with priority groups

Npg_seq_pipeline ⭐ 9

Processing and analysis of data coming from Illumina sequencing machines

Chopstitch ⭐ 9

Finding putative exons and constructing splicegraphs using Trans-ABySS contigs

Abyss Scaffold Paper ⭐ 5

Scaffolding a genome sequence assembly using ABySS

Sh Assembly ⭐ 5

K-mer counting with low memory consumption enables de novo assembly of 106x human sequence data in 2.7 hours

Graph Iss ⭐ 5

Graph-based Decoding for In Situ Sequencing

A graph-based genotyper for aligned DNA sequencing data

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