Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About
Search results for genomics transcriptomics
genomics
x
transcriptomics
x
29 search results found
Pathomicfusion
⭐
148
Fusing Histology and Genomics via Deep Learning - IEEE TMI
Cell Ontology
⭐
126
An ontology of cell types
Xpore
⭐
122
Identification of differential RNA modifications from nanopore direct RNA sequencing
Dnanalyzer
⭐
122
Revolutionizing DNA analysis and making it accessible to all through innovative AI-powered analysis and interpretive tools
Awesome Biological Visualizations
⭐
41
A list of web-based interactive biological data visualizations.
Dee2
⭐
37
Digital Expression Explorer 2 (DEE2): a repository of uniformly processed RNA-seq data
Teaching
⭐
25
This repository gives an overview of my teaching activities. Links to slides and data sets are included. Feel free to re-use my content.
Chromoformer
⭐
24
The official code implementation for Chromoformer in PyTorch. (Lee et al., Nature Communications. 2022)
Nmdc Schema
⭐
23
This repository contains the LinkML specification for the NMDC schema and the artifacts generated by LinkML.
Fishpond
⭐
23
Differential expression and allelic analysis, nonparametric statistics
Rnaseq Pipeline
⭐
18
RNA-seq pipeline for raw sequence alignment and transcript/gene quantification.
Enrich_omics
⭐
15
A python package to explore pathways, diseases and drugs associated to a list of targets (genes, proteins, etc)
Omicssuite.github.io
⭐
15
OmicsSuite website for releasing new version.
Omics
⭐
14
CRAN Task View: Genomics, Proteomics, Metabolomics, Transcriptomics, and Other Omics
Sandy
⭐
14
A straightforward and complete next-generation sequencing read simulator
Bacnet
⭐
12
BACNET is a Java based platform to develop website for multi-omics analysis
Bioinformatics
⭐
10
A suite of bioinformatics data processing and analysis pipelines, software, and training resources for common DNA and RNA sequence analysis methods.
Biomm
⭐
9
BioMM: Biological-informed Multi-stage Machine learning framework for phenotype prediction using omics data
Personalized_regression
⭐
8
Personalized Regression
Rna Seq
⭐
8
bioinformatics pipelines
Tidyomics
⭐
8
Easily install and load packages from the tidyomcis ecosystem
Ngs17
⭐
8
Materials used during #NGSchool2017
Glue Genes
⭐
7
glue for genomics and transcriptomics
Genestructuretools
⭐
7
Scrattch.io
⭐
7
Functions for handling RNA-seq files and formats as input and output for scrattch functions.
Gemma.r
⭐
7
An R wrapper for the Gemma RESTful API
Rna Seq
⭐
6
bioinformatics pipelines
Sclane
⭐
6
Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.
Gemmaapi.r
⭐
5
An R wrapper for Gemma's restful API (deprecated in favour of https://github.com/PavlidisLab/gemma.R supported for personal use and leftover dependencies).
Related Searches
Bioinformatics Genomics (541)
Python Genomics (521)
Genome Genomics (297)
R Genomics (226)
Sequencing Genomics (143)
Pipeline Genomics (127)
Jupyter Notebook Genomics (124)
Html Genomics (89)
1-29 of 29 search results
Privacy
|
About
|
Terms
|
Follow Us On Twitter
Copyright 2018-2024 Awesome Open Source. All rights reserved.