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Search results for genomics nf core

6 search results found

Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing

Scrnaseq ⭐ 119

A single-cell RNAseq pipeline for 10X genomics data

A mapping-based pipeline for creating a phylogeny from bacterial whole genome sequences

circRNA quantification, differential expression analysis and miRNA target prediction of RNA-Seq data

Pipeline for the identification of extrachromosomal circular DNA (ecDNA) from Circle-seq, WGS, and ATAC-seq data that were generated from cancer and other eukaryotic cells.

Please consider using/contributing to https://github.com/nf-core/sarek

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1-6 of 6 search results

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