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Search results for genome wgs

10 search results found

Mosdepth ⭐ 617

fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing

Wholegenomesequencing ⭐ 86

Whole Genome Sequencing analysis, WGS analysis

Referenceseeker ⭐ 85

Rapid determination of appropriate reference genomes.

Seqarray ⭐ 41

Data management of large-scale whole-genome sequence variant calls (Development version only)

Bacterial analysis Toolbox for profiling the Resistome of ESKAPE pathogens using WGS

Pyseqarray ⭐ 12

PySeqArray: data manipulation of whole-genome sequencing variants with SeqArray files in Python (pre-release version)

Seave is a web platform that enables genetic variants to be easily filtered and annotated with in silico pathogenicity prediction scores and annotations from popular disease databases. Seave stores genomic variation of all types and sizes, and allows filtering for specific inheritance patterns, quality values, allele frequencies and gene lists. Seave is open source and deployable locally, or on a cloud computing provider, and works readily with gene panel, exome and whole genome data, scaling fr

Bacterial_wgs_training ⭐ 9

In this training course you will find theory and practice material for introducing yourself to wgs analysis for bacterial, including outbreak investigation.

Wgs_sample_preparation ⭐ 9

Trim, Align to genome, Deduplicate, Realign WGS sequencing samples

Sideretro ⭐ 7

A pipeline for detecting Somatic Insertion of DE novo RETROcopies

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