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Search results for genome methylation

11 search results found

Nanopolish ⭐ 496

Signal-level algorithms for MinION data

Bismark ⭐ 335

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

Methylkit ⭐ 176

R package for DNA methylation analysis

Arioc: GPU-accelerated DNA short-read alignment

Bioinf Commons ⭐ 30

Bioinformatics library in Kotlin

Methylstar ⭐ 16

A fast and robust pre-processing pipeline for bulk or single-cell whole-genome bisulfite sequencing (WGBS) data.

Informme ⭐ 15

An information-theoretic pipeline for methylation analysis of WGBS data

Bisulfite Seq Tools ⭐ 10

Suite of tools to conduct methylation data analysis. Methods from this workspace can be used for alignment and quality control analysis for various protocols including Whole Genom Bisulfite Sequencing (WGBS), Reduced Representation Bisulfite Sequencing (RRBS) and Hybrid Selection Bisulfite Sequencing (HSBS).

Targeted Amplicon Bisulfite Sequencing Analysis Tool

Cell Free Dna Reading List ⭐ 6

Important papers relating to the biology of cell free DNA

A computational toolkit of fast and automatical identification of back-splice junctions of potential circular RNAs (circRNAs) from RNA-seq data.

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