Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About
Search results for gene ontology
gene-ontology
x
41 search results found
Goatools
⭐
673
Python library to handle Gene Ontology (GO) terms
Go Ontology
⭐
200
Source ontology files for the Gene Ontology
Deepfri
⭐
156
Deep functional residue identification
Biolink Model
⭐
149
Schema and generated objects for biolink data model and upper ontology
Uberon
⭐
126
An ontology of gross anatomy covering metazoa. Works in concert with https://github.com/obophenotype/cell-ontology
Ontobio
⭐
114
python library for working with ontologies and ontology associations
Bio4j
⭐
112
Bio4j abstract model and general entry point to the project
Ontoprotein
⭐
98
Code and datasets for the ICLR2022 paper "OntoProtein: Protein Pretraining With Gene Ontology Embedding"
Ontology Access Kit
⭐
89
Ontology Access Kit: A python library and command line application for working with ontologies
Goenrich
⭐
68
GO enrichment with python -- pandas meets networkx
Obographs
⭐
58
Basic and Advanced OBO Graphs: specification and reference implementation
Gosemsim
⭐
52
⛳ GO-terms Semantic Similarity Measures
Deepgo
⭐
45
Function prediction using a deep ontology-aware classifier
Go Site
⭐
41
A collection of metadata, tools, and files associated with the Gene Ontology public web presence.
Noctua
⭐
33
Graph-based modeling environment for biology, including prototype editor and services
Go Annotation
⭐
29
This repository hosts the tracker for issues pertaining to GO annotations.
Amigo
⭐
28
AmiGO is the public interface for the Gene Ontology.
Protege Tutorial
⭐
28
Material for GO OWL/Protege Tutorial
Sig Bio Shiny
⭐
25
An interactive application suite/interface for doing Exploration and Significant Biology on a set of Genes.
Boomer
⭐
24
Bayesian OWL ontology merging
Go_enrichment
⭐
23
Transcripts annotation and GO enrichment Fisher tests
Genescf_inactive
⭐
20
GeneSCF moved to a dedicated GitHub page, https://github.com/genescf/GeneSCF
Msigdf
⭐
18
Molecular Signatures Database (MSigDB) in a data frame
Microscope
⭐
17
ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps
Helpdesk
⭐
15
The Gene Ontology Helpdesk
Genescf
⭐
14
Gene Set Clustering based on Functional annotation
Blastviewer
⭐
10
This package contains the BLAST Viewer Tool.
Noctua Models
⭐
10
This is the data repository for the models created and edited with the Noctua tool stack for GO.
Gomap Singularity
⭐
10
GOMAP-Singularity is the containerized version of GOMAP
Neo
⭐
9
noctua entity ontology
Pathways2go
⭐
9
Code for converting between BioPAX pathways and Gene Ontology Causal Activity Models (GO-CAM)
Fastdtlmapper
⭐
7
Genome-wide gene gain/loss mapping tool using DTL(Duplication-Transfer-Loss) reconciliation method
Python_scripts
⭐
7
scripts for parsing PDB, fasta, and GO
Goexpress
⭐
7
Analysies of gene expression data using Gene Ontology
Gruffi
⭐
7
Granular Functional Filtering (Gruffi) to isolate stressed cells
Goldi
⭐
6
R Package for Gene Ontology Label Discernment and Identification.
Isopretgo
⭐
6
Isoform function prediction and interpretation
Minerva
⭐
6
React Ontology Ribbon
⭐
6
A React component for generating a heatmap type display for GO slims.
Geneontology.github.io
⭐
5
Repository for storing GO documentation, directly available through the general GO site
Gocam Sif Pyexport
⭐
5
Export GO-CAMs to SIF (Python)
1-41 of 41 search results
Privacy
|
About
|
Terms
|
Follow Us On Twitter
Copyright 2018-2024 Awesome Open Source. All rights reserved.