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Search results for ga4gh

24 search results found

Cromwell ⭐ 944

Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

Funnel is a toolkit for distributed task execution via a simple, standard API.

Benchmarking Tools ⭐ 110

Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

Ga4gh Server ⭐ 95

Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24

Workflow Execution Service Schemas ⭐ 82

The WES API is a standard way to run and manage portable workflows.

Phenopacket Schema ⭐ 64

Repository for the GA4GH phenopacket schema

Vrs Python ⭐ 44

GA4GH Variation Representation Python Implementation

GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes

Specification ⭐ 32

GA4GH Beacon specification.

Tool Registry Service Schemas ⭐ 30

APIs for discovering genomics tools, their metadata and their containers

Trigger CWL workflows via GA4GH WES and TES

Crypt4gh ⭐ 13

GA4GH cryptographic tools

Cloud Interop Testing ⭐ 9

Interoperable execution of workflows using GA4GH APIs

Beacon Python ⭐ 8

Python-based GA4GH Beacon API Server

Repository for the family history/pedigree project

Refget Compliance Suite ⭐ 7

Repository for the Google Summer of Code for the Reference Retrieval API

Ga4gh Beacon.github.io ⭐ 7

Website of ELIXIR Beacon - A GA4GH Driver Project

GA4GH TES API Service that translates tasks into Kubernetes Batch API calls

Phenopacket Tools ⭐ 6

An app and library for building, conversion, and validation of GA4GH Phenopackets.

Crypt4GH standard implementation

Bioapi Examples ⭐ 6

Code examples for working with web based bioinformatics APIs

Beacon Network ⭐ 6

Beacon Network APIs

Proxy service for injecting middleware into GA4GH TES requests

Phenopacket Store ⭐ 5

Collection of phenopackets

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