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Cuneiform ⭐ 215

Cuneiform distributed programming language

Fast multi-line FASTA/Q reader in several programming languages

Woltka: a versatile meta'omic data classifier

Jannovar ⭐ 51

Annotation of VCF variants with functional impact and from databases (executable+library)

Python implementation of Spatial Analysis of Functional Enrichment (SAFE)

Federating genomes with love (and synteny derived from functional annotations)

Loosely coupled machine learning, data-mining and bioinformatics applications in a broad range of functional languages.

Package to calculate functional similarity between genes https://biocor.llrs.dev

Functree Ng ⭐ 13

An interactive radial tree for functional hierarchies and omics data visualization

Mathiomica ⭐ 11

MathIOmica is a Mathematica package for omics data analyses

Pathway Forte ⭐ 10

A Python package for benchmarking pathway database with functional enrichment and classification methods

Genextender ⭐ 8

R/Bioconductor package for optimized functional annotation of ChIP-seq data

Fma_finder ⭐ 7

visualization, functional module alignment

Cytomine Dotslidetools ⭐ 5

dotslide2tiff tools

Wikigenomesbase ⭐ 5

A configurable codebase for launching organism specific WikiGenomes spinoff applications (e.g. ChlamBase.org) This is a web application framework for creating a model organism database leveraging the taxonomic, genetic and functional data that has been loaded to Wikidata.org by the Gene Wiki Project.

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