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Search results for format fasta

23 search results found

Gfatools ⭐ 181

Tools for manipulating sequence graphs in the GFA and rGFA formats

Catfasta2phyml ⭐ 52

Concatenates FASTA formatted files to one "phyml" (PHYLIP) formatted file

Gene prediction software

Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences

Bac Genomics Scripts ⭐ 28

Collection of scripts for bacterial genomics

Biotoolbox ⭐ 27

Tools for querying and analysis of genomic data

FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation

Tidehunter ⭐ 22

TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain

Tidehunter ⭐ 17

TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain

Ac Diamond ⭐ 14

AC-DIAMOND is a DNA-protein alignment tool

Fasta_tools ⭐ 12

This package contains Perl programs/scripts that perform frequently needed operations on FASTA format files.

Fastaio.jl ⭐ 11

Utilities to read/write FASTA format files in Julia

AntiCP2 is an updated version of AntiCP developed for predicting, designing and scanning anticancer peptides.

Carnac Lr ⭐ 7

This repository contains all DeepCLIP Python code

YOC is a whole genome alignment tool designed for collinear genomes.

A library to create and handle counts files used with PoMo.

Higlass Sequence ⭐ 5

Nucleotide sequence track for HiGlass

Read Cleaning Format Conversion ⭐ 5

Short scripts to convert or modify Bioinformatics files

Pdb2fasta ⭐ 5

change format from pdb to fasta .python file change from https://gist.github.com/jameslyons/00cad4f1ab6a49c .And C++ file is written by myself.

Routine utilities for seuqnece operation

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