Awesome Open Source

Programming Languages

Search results for bionlp

33 search results found

Biosentvec ⭐ 501

BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences

Blue_benchmark ⭐ 195

BLUE benchmark consists of five different biomedicine text-mining tasks with ten corpora.

Kindred ⭐ 152

A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).

Existing Medical Qa Datasets ⭐ 135

Multimodal Question Answering in the Medical Domain: A summary of Existing Datasets and Systems

Multi Bioner ⭐ 129

Cross-type Biomedical Named Entity Recognition with Deep Multi-task Learning (Bioinformatics'19)

Sapbert ⭐ 117

[NAACL'21 & ACL'21] SapBERT: Self-alignment pretraining for BERT & XL-BEL: Cross-Lingual Biomedical Entity Linking.

NLP framework in python for entity recognition and relationship extraction

Taiyi Llm ⭐ 92

Biomedical LLM, A Bilingual (Chinese and English) Fine-Tuned Large Language Model for Diverse Biomedical Tasks

Mediqa2019 ⭐ 45

Challenge on Textual Inference and Question Entailment in the Medical Domain https://sites.google.com/view/mediqa2019

Named Entity Recognition for biomedical entities

Phenotagger ⭐ 41

A Causal Relation Schema for Text

A large-scale (194k), Multiple-Choice Question Answering (MCQA) dataset designed to address realworld medical entrance exam questions.

Cancermine ⭐ 36

Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer

Pubrunner ⭐ 29

A framework for keeping biomedical text mining result up-to-date

Corpus of Online Medical EnTities: the cometA corpus

Data structures and code to read/write BioC XML and Json.

Civicmine ⭐ 19

Text mining cancer biomarkers for the CIVIC database

Biosemble ⭐ 17

AI assembly of bioNLP wordnets

Bioposdep ⭐ 17

Tokenization, sentence segmentation, POS tagging and dependency parsing for biomedical texts (BMC Bioinformatics 2019)

A full-text article retrieval pipeline for biomedical literature.

Pkdocclassifier ⭐ 14

Binary classifier to identify scientific publications reporting pharmacokinetic parameters estimated in vivo

Vancouver Event and Relation System for Extraction

Biowordlists ⭐ 13

Biomedical wordlists (of drugs, genes, etc) for several text mining projects

PENNER: Pattern-enhanced Nested Named Entity Recognition in Biomedical Literature (BIBM'18)

Mil Rbert ⭐ 11

MIL-RBERT: A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation Extraction (BioNLP @ ACL 2020)

Noise Reduction Methods for Distantly Supervised Biomedical Relation Extraction

Mediqa2021 ⭐ 8

Various Documents ⭐ 8

Various documents for deep Learning(Continually updated)

Parallelpymetamap ⭐ 7

This code is to run MetaMap in parallel using Python.

Bc7 Chem Id ⭐ 5

DMIS at BioCreative VII NLMChem Track

Bioner Generalization ⭐ 5

How Do Your Biomedical Named Entity Recognition Models Generalize to Novel Entities?

Related Searches

Python Bionlp (26)

Natural Language Processing Bionlp (12)

Text Mining Bionlp (8)

Corpus Bionlp (6)

Bionlp Biomedical Text Mining (5)

Machine Learning Bionlp (5)

Bioinformatics Bionlp (5)

Jupyter Notebook Bionlp (4)

Named Entity Recognition Bionlp (4)

Relation Extraction Bionlp (4)

1-33 of 33 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.