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Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

Balsamic ⭐ 40

Bioinformatic Analysis pipeLine for SomAtic Mutations In Cancer

Snakemake Wrappers ⭐ 14

🐍 Snakemake wrappers for bioinformatics.

Workflow for identifying and classifying homologous gene/protein sequences

Bioinformatics pipeline for nanopore sequencing data

Long RNA-seq analysis workflow

SARS2seq is a pipeline designed to process raw FastQ data from targeted SARS-CoV-2 sequencing and generate biologically correct consensus sequences of the SARS-CoV-2 genome.

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