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9 search results found

Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs

Ensembl Compara ⭐ 46

The Ensembl Compara Perl API and SQL schema

R package providing query functionality to BioMart instances like Ensembl

Pyensemblrest ⭐ 25

A client for the Ensembl REST API written in the Python programming language

Efficient querying of biological databases

Ensembl Genes ⭐ 13

Extract the Ensembl genes catalog to simple tables

Positive Selection ⭐ 10

Scripts and procedures for detecting positively selected genes and codons in primates

Reference Annotations ⭐ 9

Makefile for reference annotations for genes & genomic regions

Utr_add_extend_gtf ⭐ 5

Provided tool will add explicit 3'UTR and extends it into a valid Ensembl GTF file. It's useful for 3'RNAseq when 3' coordinates might not be as good as you expect.

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