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10 search results found

Decoupler Py ⭐ 112

Python package to perform enrichment analysis from omics data.

Lightweight Iterative Gene set Enrichment in R

ASAP : Automated Single-cell Analysis Pipeline

📊 Identify cell types and pathways affected by genetic risk loci.

Centipede.tutorial ⭐ 20

🐛 How to use CENTIPEDE to determine if a transcription factor is bound.

Chemrich ⭐ 19

Chemical Similarity Enrichment analysis of metabolomics datasets

rbioapi: User-Friendly R Interface to Biologic Web Services' API

Homerkit ⭐ 13

Read HOMER motif analysis output in R.

Pandas API for multiple Gene Set Enrichment Analysis implementations in Python (GSEApy, cudaGSEA, GSEA)

R package for QC of enrichment based NGS assays. ChIP-seq, cut&run, ATAC-seq, etc.

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