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Search results for basecalling

basecalling x
10 search results found
Bonito ⭐ 354
A PyTorch Basecaller for Oxford Nanopore Reads
Dorado ⭐ 309
Oxford Nanopore's Basecaller
Megalodon ⭐ 172
Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.
Remora ⭐ 120
Methylation/modified base calling separated from basecalling.
Rerio ⭐ 80
Research release basecalling models and configurations
Porecov ⭐ 38
SARS-CoV-2 workflow for nanopore sequence data
Pyguppyclient ⭐ 25
Python client library for Guppy
Modphred ⭐ 12
modPhred is a pipeline for detection of DNA/RNA modifications from raw ONT data
Guppy_parameter_optimiser ⭐ 7
A small bash script that automates sweeping Guppy parameters in an attempt to optimise basecalling rate
Radian ⭐ 5
Nanopore direct RNA basecaller
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Python Basecalling (7)
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1-10 of 10 search results
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