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Search results for assembly dna
assembly
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dna
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23 search results found
Whatshap
⭐
290
Read-based phasing of genomic variants, also called haplotype assembly
Shasta
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269
[MOVED] Moved to paoloshasta/shasta. De novo assembly from Oxford Nanopore reads
Pyfastx
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211
a python package for fast random access to sequences from plain and gzipped FASTA/Q files
3d Dna
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176
3D de novo assembly (3D DNA) pipeline
Pydna
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140
Clone with Python! Data structures for double stranded DNA & simulation of homologous recombination, Gibson assembly, cut & paste cloning.
Metagraph
⭐
81
Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly
Dnacauldron
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43
⚗️ Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies
Algorithms Dna Sequencing
⭐
26
🧬 Algorithms for DNA Sequencing by Johns Hopkins University
Vgp Tools
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26
Primavera
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25
🌸 Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.
Dnaweaver
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22
A route planner for DNA assembly
Ra Integrate
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18
DNA assembler developed on FER (Croatia), RBI (Croatia) and GIS (Singapore)
Synbio
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15
a DNA assembly library
Bandwitch
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13
💫 Computer-aided DNA assembly validation and identification from restriction digests.
Wetlabcalc
⭐
12
Wetlab Calculator
Repp
⭐
10
Repository-based plasmid design
Primers
⭐
9
A PCR primer tool for DNA assembly flows
Goldenhinges
⭐
8
🔗 Short overhangs design for DNA assembly
Nanomark
⭐
7
DNA Assembly Benchmark
Agwg Merge
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6
Falas
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6
Fragment-Aware Local Assembly for Short-reads
Kappagate
⭐
5
🔮 Predict DNA assembly clone validity rates - powered by Kappa
Mcds
⭐
5
MCDS
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1-23 of 23 search results
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