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3dunetcnn ⭐ 1,750

Pytorch 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation

Medicalnet ⭐ 1,648

Many studies have shown that the performance on deep learning is significantly affected by volume of training data. The MedicalNet project provides a series of 3D-ResNet pre-trained models and relative code.

Medicaldetectiontoolkit ⭐ 1,249

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

Learning Deep Learning ⭐ 943

Paper reading notes on Deep Learning and Machine Learning

Medmnist ⭐ 903

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

Medicalzoopytorch ⭐ 896

A pytorch-based deep learning framework for multi-modal 2D/3D medical image segmentation

AMI Medical Imaging (AMI) JS ToolKit

Invesalius3 ⭐ 553

3D medical imaging reconstruction software

Pytorch Medical Segmentation ⭐ 536

This repository is an unoffical PyTorch implementation of Medical segmentation in 2D and 3D.

Medical image processing in Python

U2net_torch ⭐ 219

MICCAI2019:3D U$^2$-Net: A 3D Universal U-Net for Multi-Domain Medical Image Segmentation

Alizams ⭐ 199

Cnn 3d Images Tensorflow ⭐ 176

3D image classification using CNN (Convolutional Neural Network)

Vnet Tensorflow ⭐ 140

Implementation of vnet in tensorflow for medical image segmentation

Self Supervised 3d Tasks ⭐ 131

Starviewer ⭐ 103

Starviewer, a cross-platform open source medical imaging software

3d Ru Net ⭐ 94

A SlidingWindow-Free Accurate and Fast 3D Medical Image Segmentation Framework

3d Medical Segmentation Gan ⭐ 81

3D Liver Segmentation with GAN

3dunet_abdomen_cascade ⭐ 79

Hic Data Analysis Bootcamp ⭐ 78

Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

Slicerdmri ⭐ 65

Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.

Elastic Boundary Projection ⭐ 45

Implementation of EBP - CVPR 2019

Slicercustomapptemplate ⭐ 38

Template to be used as a starting point for creating a custom 3D Slicer application

Protection Mask Covid 19 ⭐ 32

3D printed Protection mask. for tunisian doctors and medical srtaff. A prototype face shield that we developed. In three days, we went through dozens of prototypes and many verifications with doctors and experts.

A GAN based framework for adding and removing medical evidence in 3D volumetric medical scans

Pytorch Unet3d Single_channel ⭐ 23

3D-Unet: patched based Pytorch implementation for medical images segmentation

Landmark Detection ⭐ 23

Automatic tool for landmark localisation in 3D medical images

3D conditional GAN for medical image segmentation

medical image visualization library and development toolkit

Registrationshop ⭐ 20

Interactive registration tool for 3D medical datasets

Scalismo Ui ⭐ 20

Visualization for Statistical Shape Models and Medical Images based on Scalismo.

IntrA: 3D Intracranial Aneurysm Dataset for Deep Learning

Wpfcoreuniversalapp ⭐ 17

WPF(.Net Core 3.1)基于MVVM+View2D,3D的模板应用

Highres3dnet ⭐ 17

Conresnet ⭐ 16

[IEEE-TMI2020] Inter-slice Context Residual Learning for 3D Medical Image Segmentation

Visualization Dmim ⭐ 14

DICOM 3D Medical Image Modeling (DMIM)

Tciabrowser ⭐ 14

3D Slicer module for browsing and downloading medical imaging collections from The Cancer Imaging Archive (TCIA).

Fast Registration Of image Groups

Asclepios Dicom Viewer ⭐ 11

Bachelor's thesis project. Bachelor thesis project. A DICOM Viewer written in C++, QT and VTK.

Tissue Segmentation Of Brain Mri Images ⭐ 10

3d U Net Keras ⭐ 8

3D-Unet: patched based Keras implementation for medical images segmentation

Rosmed.github.io ⭐ 8

Awesome Medical Imaging ⭐ 8

3d_coordconv_segmentation ⭐ 7

Grand Challenge 2017 Multi-Modality Whole Heart Segmentation

Shieldsupnz ⭐ 7

Repository of 3D print files and instructions to facilitate production of face shields for medical purposes

Numpy_array_to_tfrecords ⭐ 7

TFRecord converter for numpy array data (e.g. 3D images for medical image processing)

Kidneytumorseg ⭐ 6

KiTS19: 2019 Kidney Tumor Segmentation Challenge

3d_medical_imaging ⭐ 6

Segmentation of Blood Vessels from 3D Medical Image

Medical 3D Voxel Classifier using DNN

Vnet Cafffe_guide ⭐ 5

This blog is addressed to new-bees to Medical image segmentation using caffe

Caffe_3d_crf_rnn ⭐ 5

Caffe with 3D CRF-RNN for medical image analysis

Slicerdicomwebbrowser ⭐ 5

3D Slicer extension for browsing and downloading medical imaging collections from DICOMweb databases

Shape-aware Semi-supervised 3D Semantic Segmentation for Medical Images

Vesselenhance ⭐ 5

Enhance vessel structures in 3D images using Hessian/Frangi/eigenvalue filter through the ITK library

Medical Healthcare 3d Imaging Ai ⭐ 5

🏥 👁️‍🗨️ Medical Healthcare AI | Robotic Surgery | Automated Brain Tumour Segmentation | Skin Cancer Lesion Detection & Segmentation (Melonama Recognition) | Lung Cancer detection (Chest CT Scan) | IMAGE SEGMENTATION TECHNIQUES

caffe3D supports many operations for medical image analysis (segmentation/reconstruction/classification...)

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