Awesome Open Source

Programming Languages

Search results for proteomics

228 search results found

Software for RNA-Seq analysis to create sample-specific proteoform databases from RNA-Seq data

Wikigenomesbase ⭐ 5

A configurable codebase for launching organism specific WikiGenomes spinoff applications (e.g. ChlamBase.org) This is a web application framework for creating a model organism database leveraging the taxonomic, genetic and functional data that has been loaded to Wikidata.org by the Gene Wiki Project.

Amino acid modifications for mass spectrometry

Cptac Proteomics Pipeline ⭐ 5

The research and processing repo for import of CPTAC data into cBioPortal

Nf Encyclopedia ⭐ 5

A NextFlow pipeline for chromatogram library DIA proteomics workflows

Denovogui ⭐ 5

Graphical user interface for de novo sequencing of tandem mass spectra

Platform for Distributed Proteomics Software

Rcpa.tools ⭐ 5

Proteomics Tools Suite

Lgpr Usage ⭐ 5

Demos and experiments using the R package lgpr

custom wrappers of frequently used R code

Panelomix ⭐ 5

PanelomiX - the R package to create panels, combinations of biomarkers

Proteomics Wine Env ⭐ 5

The project lets you package up a Wine environment into a single shell script for distribution to other Linux instances or users.

Peptacular ⭐ 5

A spectacularly simple package for working with peptide sequences.

PTM-Invariant Peptide Identification. An open search tool.

Proteinclusterquant ⭐ 5

Protein Cluster Quant is a Java software for the analysis of complex proteomics samples (quantitative or not). It helps to reduce the redundancy of the peptide-to-protein relationship and to visualize the results in a bipartite network (Cytoscape).

Proteomatic ⭐ 5

Proteomatic: a free and accessible Proteomics pipeline

Synthedia ⭐ 5

Create synthetic DIA LC-MS/MS for proteomics experiments

Matrixqcvis ⭐ 5

Spectrum_similarity ⭐ 5

Scoring functions to compare MS/MS spectra

Kinase Activity Predictions from shotgun proteomics

Spatialexperiment Analysis ⭐ 5

repo to explore spatial data in R/Bioconductor and Python

Proteomic Data Manager ⭐ 5

Proteomic Data Manager is a Web-based integrated plateform to combine data storage/backup, process and visualization of MS-based Proteomics data.

EMBL-EBI PRIDE Archive R package

Protgenerics ⭐ 5

S4 generic functions for Bioconductor mass spectrometry infrastructure

Dia Umpire ⭐ 5

Computational analysis for mass spectrometry-based proteomics data

Coxlab_bug_reporting ⭐ 5

MaxQuant and Perseus Bug Reporting

Peptide Shaker Online ⭐ 5

Web-based framework for interactive visual analysis of proteomics data

Related Searches

Python Proteomics (125)

Protein Proteomics (117)

R Proteomics (112)

Bioinformatics Proteomics (78)

201-228 of 228 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.