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174 search results found

Quality Control ⭐ 13

Carnegie Hall Archives maintains a series of small, portable scripts to expedite batch processes for quality control on our Digital Collections.

Biovarase ⭐ 13

a clinical quality control data management project

Genome Seek ⭐ 12

Clinical Whole Genome Sequencing Pipeline

Riboseqc ⭐ 12

Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.

NeuroImaging Quality Control (niQC)

INNUENDO quality control of reads, de novo assembly and contigs quality assessment, and possible contamination search

Php Todo Finder ⭐ 11

[Git hook] Do not allow commits if the total amount of to-do increased or is above a user-defined threshold.

DTIPrep performs a "Study-specific Protocol" based automatic pipeline for DWI/DTI quality control and preparation

Pytolemaic ⭐ 10

Toolbox for analysis of model's quality and model's description. For further details see

Longread_plots ⭐ 10

A collection of plots for long read sequencing FastQ files from devices like Oxford Nanopore's MinION and PromethION.

Randomvaluesnpp ⭐ 10

Generate random values plug-in for Notepad++. Use this plugin to generate passwords, guids or random datasets in CSV, JSON, XML and SQL formats. Use the fake test data for performance and QA testing to improve software quality during application and database development.

This is a read-only mirror, comments, issues and pull requests are very welcome on https://git.ufz.de/rdm-software/saqc.

Gwastools ⭐ 10

Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis

Snomed Drools ⭐ 10

A SNOMED CT Concept Validation Library using Drools (Business Rules Engine)

Argodmqc_owc ⭐ 9

Argo float salinity calibration software

Dockerfiles ⭐ 9

Dockerfiles for geo/spatial applications, services, and libraries

Kalitesihirbazi ⭐ 9

Online Kalite Yönetim Sistemi.

mrQA: tools for quality assurance in medical imaging datasets, including protocol compliance

Ribominer ⭐ 9

a toolset for mining multi-dimensional features of the translatome with ribosome profiling data

Quality Control ⭐ 9

Consistency Checks for spreadsheet

Quality Control Using Deep Learning ⭐ 9

A deep learning based quality control pipeline to detect defective products

A CLI to run all kinds of code quality measurements to align your team with company goals

A comprehensive quality-control and quantification RNA-seq pipeline

Processing, quality control and analysis of GAM datsets

Supermatrix ⭐ 8

scripts to process, join, split, or add new proteins to a supermatrix alignment using hmms

Go code quality inspector

Snomed Drools Rules ⭐ 8

LaTeX Build Quality Control: checks the log file after LaTeX and finds error reports

Bayesianquicknat ⭐ 8

Trained Models and Deployment code for segmentation and Quality Control of whole-brain segmentation of MRI T1 scans

Display segmentation results over MRI scans in Jupyter notebooks.

Immuneaging2017 ⭐ 8

Code for Celia and Nils' immune aging project.

Isimip Qc ⭐ 8

A command line tool for the quality control of climate impact data of the ISIMIP project.

Jatstemplate ⭐ 8

Basic JATS document template generator plugin for OJS

Bcbio_docker ⭐ 8

Automated Docker builds for bcbio

Visualizationqualitycontrol ⭐ 7

Visualization methods for omics dataset quality control

Digiquali ⭐ 7

Gestion et suivi du SMQ dans Dolibarr

Lescroart2023 ⭐ 7

Archived code for analyses in "Extensive phylogenomic discordance and the complex evolutionary history of the Neotropical cat genus Leopardus" (Lescroart et al. 2023, MBE)

Codescene Jenkins Plugin ⭐ 7

DEPRECATED! (Integrate CodeScene in Jenkins builds)

QuinCe is an online tool for processing and quality control of data from scientific instruments, with a primary focus on oceanic data.

Fastq.bio Serverless ⭐ 7

An interactive web tool for quality control of DNA sequencing data, using Cloudflare workers running WebAssembly

Quality Control Tools for Ocean Mapping

Rnaseqfpro ⭐ 6

rnaSeqFPro (beta) is a script for full processing of RNASeq data starting from fastq files. It performs fastqc quality control, mapping to the human genome hg19 using STAR second pass, counting with featurecounts using GENCODE gtf annotation, creates master table, performs differential analysis using DESeq2, generates graphs in gglot2.

Statistical Quality Control ⭐ 6

This repo contains a powerful tool made using python which is used to visualize, analyse and finally assess the quality of the product depending upon the given observations

Quality Control Summary Pipeline for Array-based Genome Studio Projects (idats, raw genotype quality)

Sonarqube Plugin For Businessworks6 ⭐ 6

SonarQube is an open source quality management platform, dedicated to continuously analyzing and measuring TIBCO BusinessWorks 6 source code quality. In order to guarantee the quality of software development projects, it is important to be able to verify that a continuous integration build meets a minimum set of quality control criteria. SonarQube plugin for BusinessWorks 6 is a custom extension developed in order to manage TIBCO BusinessWorks 6.x code quality and follow BW design best practic

Imagenetmultilabel ⭐ 6

Fine-grained ImageNet annotations

Lavalampplot ⭐ 6

instructions, python and R code for generating lava lamp plots of kmer coverage

Bcbiosmallrna ⭐ 6

R package to analyze data after small RNAseq with bcbio

PCP Quality Assessment Protocol

Bam Lorenz Coverage ⭐ 6

Generate Lorenz plots and Coverage plots directly from BAM files

Bgcargodmqc ⭐ 6

python package for performing DMQC on BGC-Argo data

3’ Tag RNA-seq pipeline (Work in progress)

NAnostring quality Control dasHbOard

Industry Classifier ⭐ 6

deep learning based visual inspection system for industrial quality control

Methylumi ⭐ 6

QCkit provides useful functions for data quality control and manipulation including updating data to DarwinCore standards, unit conversions, and data flagging.

Mikrokondo ⭐ 6

A simple pipeline for bacterial assembly and quality control

Gwas Utils ⭐ 6

Collection of tools and scripts to manage GWAS Catalog related infrastructure.

🧩 Mass-revert extension designed for osm-revert

Publicqcforum ⭐ 5

A public forum to talk about Quality Control of Argo measurements

Okmesonet ⭐ 5

R package to retrieve Oklahoma Mesonet climatological data

MetaQC: Objective Quality Control and Inclusion/Exclusion Criteria for Genomic Meta-Analysis

QC report generator for Hi-C pairs file

Microarraypipeline ⭐ 5

MAAPster is a comprehensive tool to perform transcriptome analysis of human or mouse Affymetrix gene expression data

Quality control plotting for long reads

An awesome Oxford Nanopore Pipeline for direct RNA-sequencing

Quality Control for DArT SNPs

Msstatsqc ⭐ 5

A Bioconductor/R package for longitudinal system suitability monitoring and quality control for proteomic experiments

Check_ctd Rdb ⭐ 5

Checking the status of the CTD Reference database (RDB)

Variable Life Adjusted Display and other risk-adjusted quality control charts

Quality Control, Mapping and Reads Count for RNA-Seq Analysis

Automated and friendly RNA-seq analysis (deprecated)

Dashqc_fmri ⭐ 5

An interactive dashboard for fMRI data quality control

101-174 of 174 search results

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