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Search results for gwas

114 search results found

Locusfocus ⭐ 6

Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)

Bayesian Gene Heritability Analysis from GWAS summary statistics

Tao Yan's Plot Toolkit

Cleansumstats ⭐ 6

Convert GWAS sumstat files into a common format with a common reference for positions, rsids and effect alleles.

Timshel 2020 ⭐ 6

Code to reproduce analysis and figures for 'Genetic mapping of etiologic brain cell types for obesity' (Timshel, eLife 2020)

Quality Control Summary Pipeline for Array-based Genome Studio Projects (idats, raw genotype quality)

Somalogic ⭐ 6

SomaLogic data analysis

Postgwas Tools ⭐ 5

These are tools for post GWAS analysis. Please see below link as a document for install and use.

Pygwasvcf ⭐ 5

Python library for reading GWAS summary statistics in GWAS-VCF files

Coupled Mixed Model

Pcsstools ⭐ 5

Tools for regression using pre-computed summary statistics

A k-mer counter that streams gene-cluster specific k-mers, while keeping k-mer positional information. Useful for microbial GWAS analyses with higher interpretability.

Ctlmapping ⭐ 5

Correlated Trait Locus (CTL) mapping

101-114 of 114 search results

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