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cwl
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145 search results found
Cwl Format
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9
A very opinionated code formatter for CWL
Kf Rnaseq Workflow
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9
🔬 RNA-Seq workflow for Kids-First DRC
Cloud Interop Testing
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9
Interoperable execution of workflows using GA4GH APIs
Capanno
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9
cwl/wdl/sm/nf files, tool and workflow metadata, and input specifications.
Bcbio_docker
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8
Automated Docker builds for bcbio
Mariner
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8
The Gen3 Workflow Execution Service
Cwl2argparse
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8
cwl2argparse generates an argparse definition from CWL tool arguments that can be pasted in a Python program and used
Pipelines Cwl
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8
Pipelines developed and used by 4DN-DCIC in Common Workflow Language
Q2cwl
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8
Prototype interface for automatically generating CWL tools from QIIME 2 actions
Ep3
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8
A workflow engine for CWL which aims to have a pluggable architecture
Gales
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8
Genomic Annotation Logic and Execution System
Cerise
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7
A REST service for running CWL workflows on remote clusters
Tidycwl
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7
Tidy Common Workflow Language Tools and Workflows
Cwl
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7
An evaluation script based on the C/W/L framework that is TREC Compatible and provides a replacement for INST_EVAL, RBP_EVAL and TREC_EVAL
Cwl Inspector
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7
This tool provides a handy way to inspect properties of tools or workflows written in Common Workflow Language
Cwl For Remote Container Template
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7
A template to write CWL documents with VSCode with remote container extension
Sbpack
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7
Command line utility to pack and upload/download CWL to/from SB powered platform
Epigenomics_cwl
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7
SCREW: A Reproducible Workflow for Single-Cell Epigenomics
Rnaseqsim
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6
Cwl Mode
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6
CWL mode for Emacs
Bioc2020rcwl
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6
Bioconductor toolchain for usage and development of reproducible bioinformatics pipelines
Gatk Cwl Generator
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6
Generates CWL files from the GATK documentation
Sbg Cgc_course2018
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6
IARC course on analyzing TCGA data in the SevenBridges Genomics CancerGenomicsCloud (SBG-CGC)
Containerinception
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6
Gerber: Generalized Easy Reproducible Bioinformatics Environment wRapper
Kf Jointgenotyping Workflow
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6
🔬 Joint genotyping workflow for Kids-First DRC
Workflow Is Cwl
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6
This repository contains CWL descriptions of the various tools which will allow you to build workflows for the annotation of transcripts
Test_bcbio_cwl
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6
Test workflows, run scripts and data for bcbio Common Workflow Language integration
Examples Compute
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6
Tindaisy
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6
CWL somatic variant caller
Autopore
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6
Suite of CWL workflows for nanopore de novo assembly.
Dockstore Tool Bamstats
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6
A repo for the BAMStats command, used as the tutorial for Dockstore
Sevenbridges Cwl Draft2 Upgrader
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6
Command line tool to upgrade sbg:draft2 to CWL v1.0.
L7g
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5
Main repo for the Lightning system being developed by Curii.
Assemblosis
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5
CWL-based automated bioinformatics workflow for PacBio and Illumina data
Biowardrobe Airflow Analysis
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5
BioWardrobe's backend rewritten for Apache Airflow.
Workflow Tools Evaluation
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5
Evaluating workflow tools and formats, such as the Common Workflow Language (CWL) for possible use within NBIS
Cmdparser
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5
An easy to use Command Line Parser and Common Workflow Language (CWL) specification creater/reader
Cwl Upgrader
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5
Upgrade CWL syntax to a newer version
Reana Workflow Engine Cwl
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5
REANA Workflow Engine CWL
D2s Project Template
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5
📋 Template to build CWL workflows to convert data to a RDF Knowledge Graph and deploy services.
One Workflow Many Ways
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5
Implementing bamqc over and over again
Rawg
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5
RNA-Seq Analysis Workflow Generator
Cwl Tutorial
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5
This is a tutorial for Common Workflow Language (CWL)
Galaxy2cwl
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5
Converter from Galaxy tool XML to CWL CommandLineTool
Msbx5420spring2019
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5
Course material for MSBX5420 at CU-Boulder
101-145 of 145 search results
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