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The Top 7 Somatic Open Source Projects

Open source projects categorized as Somatic
Categories > Somatic
Sarek ⭐ 299
Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing
most recent commit 3 months ago
Pcgr ⭐ 234
Personal Cancer Genome Reporter (PCGR)
most recent commit 6 months ago
Mutscan ⭐ 127
Detect and visualize target mutations by scanning FastQ files directly
most recent commit 2 years ago
Sarek ⭐ 126
Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
most recent commit 4 years ago
Gencore ⭐ 103
Generate duplex/single consensus reads to reduce sequencing noises and remove duplications
most recent commit 6 months ago
Dockstore Cgpwgs ⭐ 9
Dockstore implementation of CGP core WGS analysis
most recent commit 4 years ago
Mgp1000 ⭐ 7
Nextflow bioinformatics pipeline for large-scale analysis of Multiple Myeloma genomes
most recent commit 4 months ago
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