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The Top 270 Python Scientific Computing Open Source Projects

Categories > Science > Scientific Computing
Scipy ⭐ 9,677
SciPy library main repository
dependent packages 14,277total releases 78most recent commit 8 hours agopypi scipy} Downloads
Spack ⭐ 2,687
A flexible package manager that supports multiple versions, configurations, platforms, and compilers.
most recent commit 8 hours ago
Scikit Optimize ⭐ 2,247
Sequential model-based optimization with a `scipy.optimize` interface
dependent packages 94total releases 19most recent commit 6 months agopypi scikit-optimize} Downloads
Numcpp ⭐ 2,156
C++ implementation of the Python Numpy library
most recent commit 3 months ago
Pycuda ⭐ 1,279
CUDA integration for Python, plus shiny features
total releases 2most recent commit 3 months ago
Itk ⭐ 1,021
Insight Toolkit (ITK) -- Official Repository. ITK builds on a proven, spatially-oriented architecture for processing, segmentation, and registration of scientific images in two, three, or more dimensions.
dependent packages 2total releases 4most recent commit 3 days ago
Eliot ⭐ 963
Eliot: the logging system that tells you *why* it happened
dependent packages 18total releases 26most recent commit a month agopypi eliot} Downloads
Ruptures ⭐ 959
ruptures: change point detection in Python
dependent packages 14total releases 28most recent commit 12 days agopypi ruptures} Downloads
Pyopencl ⭐ 889
OpenCL integration for Python, plus shiny features
dependent packages 2total releases 44most recent commit 7 days ago
Awesome Scientific Computing ⭐ 773
😎 Curated list of awesome software for numerical analysis and scientific computing
most recent commit 2 months ago
Poliastro ⭐ 621
poliastro - 🚀 Astrodynamics in Python
dependent packages 2total releases 41most recent commit 19 days agopypi poliastro} Downloads
Pygam ⭐ 493
[HELP REQUESTED] Generalized Additive Models in Python
dependent packages 12total releases 25most recent commit 2 years agopypi pygam} Downloads
Kneed ⭐ 486
Knee point detection in Python 📈
dependent packages 33total releases 22most recent commit 14 days agopypi kneed} Downloads
Scikit Video ⭐ 485
Video Processing in Python
most recent commit 2 years ago
Boxx ⭐ 445
Tool-box for efficient build and debug in Python. Especially for Scientific Computing and Computer Vision.
dependent packages 1total releases 63most recent commit 5 days agopypi boxx} Downloads
Loopy ⭐ 441
A code generator for array-based code on CPUs and GPUs
most recent commit 8 days ago
Itkwidgets ⭐ 423
Interactive Jupyter widgets to visualize images, point sets, and meshes in 2D and 3D
dependent packages 10total releases 67most recent commit 3 months agopypi itkwidgets} Downloads
Pyemd ⭐ 388
Fast EMD for Python: a wrapper for Pele and Werman's C++ implementation of the Earth Mover's Distance metric
dependent packages 27total releases 16most recent commit 9 months agopypi pyemd} Downloads
Datacube Core ⭐ 381
Open Data Cube analyses continental scale Earth Observation data through time
dependent packages 14total releases 29most recent commit 5 days agopypi datacube} Downloads
Datoviz ⭐ 359
⚡ High-performance GPU interactive scientific data visualization with Vulkan
most recent commit a month ago
Fipy ⭐ 355
FiPy is a Finite Volume PDE solver written in Python
most recent commit 8 days ago
Simpeg ⭐ 355
Simulation and Parameter Estimation in Geophysics - A python package for simulation and gradient based parameter estimation in the context of geophysical applications.
most recent commit 10 days ago
Yt ⭐ 344
Main yt repository
dependent packages 7total releases 46most recent commit 14 hours agopypi yt} Downloads
Bmc ⭐ 341
Notes on Scientific Computing for Biomechanics and Motor Control
most recent commit 6 months ago
Meshpy ⭐ 331
2D/3D simplicial mesh generator interface for Python (Triangle, TetGen, gmsh)
total releases 2most recent commit 6 months ago
Openpnm ⭐ 298
A Python package for performing pore network modeling of porous media
dependent packages 1total releases 38most recent commit 19 hours agopypi openpnm} Downloads
Impyute ⭐ 293
Data imputations library to preprocess datasets with missing data
dependent packages 1total releases 8most recent commit 7 months agopypi impyute} Downloads
Neurodiffeq ⭐ 270
A library for solving differential equations using neural networks based on PyTorch, used by multiple research groups around the world, including at Harvard IACS.
total releases 14most recent commit 2 months ago
Pysph ⭐ 267
A framework for Smoothed Particle Hydrodynamics in Python
total releases 8most recent commit 3 months ago
Reprozip ⭐ 256
ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.
dependent packages 6total releases 29most recent commit a month agopypi reprounzip} Downloads
Findiff ⭐ 247
Python package for numerical derivatives and partial differential equations in any number of dimensions.
dependent packages 8total releases 29most recent commit 18 days agopypi findiff} Downloads
Oq Engine ⭐ 246
OpenQuake's Engine for Seismic Hazard and Risk Analysis
dependent packages 1total releases 39most recent commit 12 hours agopypi openquake.engine} Downloads
Scikit Garden ⭐ 242
A garden for scikit-learn compatible trees
dependent packages 2total releases 4most recent commit 4 months agopypi scikit-garden} Downloads
Visit ⭐ 231
VisIt - Visualization and Data Analysis for Mesh-based Scientific Data
most recent commit a day ago
Pyzo ⭐ 220
Python to the people
most recent commit 2 months ago
Plip ⭐ 196
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294
dependent packages 1total releases 24most recent commit 2 months agopypi plip} Downloads
Freud ⭐ 172
Powerful, efficient particle trajectory analysis in scientific Python.
dependent packages 5total releases 24most recent commit 10 days agopypi freud-analysis} Downloads
Galpy ⭐ 171
Galactic Dynamics in python
dependent packages 6total releases 14most recent commit 10 days agopypi galpy} Downloads
Py Pde ⭐ 167
Python package for solving partial differential equations using finite differences.
dependent packages 1total releases 69most recent commit a month agopypi py-pde} Downloads
Solidspy ⭐ 163
2D-Finite Element Analysis with Python
dependent packages 1total releases 18most recent commit 6 months agopypi solidspy} Downloads
Espresso ⭐ 156
The ESPResSo package
most recent commit 4 days ago
Regionmask ⭐ 155
plotting and creation of masks of spatial regions
dependent packages 7total releases 12most recent commit 22 days agopypi regionmask} Downloads
Awesome Scientific Python ⭐ 152
A curated list of awesome scientific Python resources
most recent commit 3 months ago
Harold ⭐ 146
An open-source systems and controls toolbox for Python3
total releases 10most recent commit a month ago
Bmspy ⭐ 146
Python Block-Model Simulator. An alternative to simulink in python.
total releases 15most recent commit 2 years ago
Gdl ⭐ 138
GDL - GNU Data Language
most recent commit 17 days ago
Datajoint Python ⭐ 128
Relational data pipelines for the science lab
dependent packages 16total releases 61most recent commit 9 days agopypi datajoint} Downloads
Discretize ⭐ 126
Discretization tools for finite volume and inverse problems.
dependent packages 1total releases 17most recent commit 16 days ago
Siconos ⭐ 120
Simulation framework for nonsmooth dynamical systems
most recent commit 15 days ago
Cytoflow ⭐ 120
A Python toolbox for quantitative, reproducible flow cytometry analysis
total releases 21most recent commit 2 months ago
Conduit ⭐ 115
Simplified Data Exchange for HPC Simulations
total releases 7most recent commit 11 days ago
Partia Computing Michaelmas ⭐ 112
Activities and exercises for the Part IA computing course in Michaelmas Term
most recent commit 8 months ago
Aicsimageio ⭐ 111
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
dependent packages 24total releases 58most recent commit 2 days agopypi aicsimageio} Downloads
Bssw.io ⭐ 108
Better Scientific Software Homepage
most recent commit a day ago
Regionmask ⭐ 103
plotting and creation of masks of spatial regions
most recent commit a year ago
Gis4wrf ⭐ 103
QGIS toolkit 🧰 for pre- and post-processing 🔨, visualizing 🔍, and running simulations 💻 in the Weather Research and Forecasting (WRF) model 🌀
most recent commit 4 months ago
P4pdes ⭐ 102
C and Python examples from my book on using PETSc to solve PDEs
most recent commit 2 months ago
Scirun ⭐ 97
SCIRun is a Problem Solving Environment, for modeling, simulation and visualization of scientific problems. This is version 5, the upgraded version of SCIRun v4.
most recent commit 5 days ago
Pylbm ⭐ 96
Numerical simulations using flexible Lattice Boltzmann solvers
total releases 10most recent commit 4 months ago
Pymfem ⭐ 90
Python wrapper for MFEM
most recent commit 2 months ago
Spirit ⭐ 82
Atomistic Spin Simulation Framework
most recent commit 6 months ago
Ddgspring2016 ⭐ 80
Code repository for 15-869 Discrete Differential Geometry at CMU in Spring 2016.
most recent commit 6 years ago
Autowig ⭐ 79
Automatic Wrapper and Interface Generator
most recent commit 2 years ago
Pism ⭐ 77
Repository for the Parallel Ice Sheet Model (PISM)
most recent commit 3 days ago
Bandup ⭐ 68
BandUP: Band Unfolding code for Plane-wave based calculations
most recent commit a year ago
Garlicsim ⭐ 67
Pythonic framework for working with simulations.
most recent commit 7 years ago
Buildingspy ⭐ 66
Python modules for automating Modelica simulations and for running unit test for the Buildings library
most recent commit 16 days ago
Nsd ⭐ 65
Numerical Software Development
most recent commit a year ago
Xitorch ⭐ 65
Differentiable scientific computing library
most recent commit 3 months ago
Vim Cellmode ⭐ 64
Vim MATLAB-like cell execution for tmux/ipython
most recent commit 2 years ago
Source ⭐ 63
The main source repository for the Raysect project.
most recent commit 2 days ago
Vtkbool ⭐ 63
A new boolean operations filter for VTK
most recent commit 8 months ago
Py_resources ⭐ 62
Collection of Python learning resources
most recent commit 4 months ago
Scicompforchemists ⭐ 61
Scientific Computing for Chemists text for teaching basic computing skills to chemistry students using Python, Jupyter notebooks, and the SciPy stack. This text makes use of a variety of packages including NumPy, SciPy, matplotlib, pandas, seaborn, NMRglue, SymPy, scikit-image, and scikit-learn.
most recent commit 5 days ago
Mmtf Pyspark ⭐ 60
Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
total releases 14most recent commit 12 days ago
Kwant ⭐ 58
Mirror of the Kwant project https://gitlab.kwant-project.org/kwant/kwant
most recent commit 2 months ago
Python Data Science Project ⭐ 57
Template repository for a Python 3-based (data) science project
most recent commit a year ago
Nutils ⭐ 51
The nutils project
most recent commit 9 days ago
Boxtree ⭐ 49
Quad/octree building for FMMs in Python and OpenCL
most recent commit 19 days ago
Quantum Python Lectures ⭐ 48
A series of self-study lectures on using Python for scientific computing at the graduate level in atomic physics and quantum optics.
most recent commit 7 years ago
Itksphinxexamples ⭐ 47
Cookbook examples for the Insight Toolkit documented with Sphinx
most recent commit 2 days ago
Pytim ⭐ 45
a python package for the interfacial analysis of molecular simulations
dependent packages 1total releases 18most recent commit 2 months agopypi pytim} Downloads
Fb Message Parser ⭐ 45
Parse your Facebook messages!
most recent commit 7 years ago
Payton ⭐ 44
Payton! Kickstart any 3D OpenGL + GTK Ideas in a few seconds!
total releases 85most recent commit 13 days ago
Lectures ⭐ 43
Lectures for the course "Scientific Programming in Python" at Osnabrück University
most recent commit a year ago
Pybobyqa ⭐ 42
Python-based Derivative-Free Optimization with Bound Constraints
dependent packages 2total releases 7most recent commit 6 months agopypi Py-BOBYQA} Downloads
Oommfc ⭐ 42
OOMMF calculator.
dependent packages 2total releases 12most recent commit 6 days ago
Python Matematica ⭐ 41
Explorando aspectos fundamentais da matemática com Python e Jupyter
most recent commit 9 days ago
Python In Neuroscience Tutorials ⭐ 38
Collection of tutorials about methods of computational neuroscience using Python
most recent commit 5 years ago
Nagpythonexamples ⭐ 37
Examples and demos showing how to call functions from the NAG Library for Python
most recent commit 2 months ago
Funfact ⭐ 35
Tensor decomposition with arbitrary expressions: inner, outer, elementwise operators; nonlinear transformations; and more.
most recent commit 18 days ago
Gcpy ⭐ 34
Python toolkit for GEOS-Chem.
most recent commit a month ago
Diffgeoops ⭐ 34
This repository contains a Python implementation of the paper "Discrete Differential-Geometry Operators for Triangulated 2-Manifolds" by Meyer et. al. VisMath 2002
most recent commit 2 months ago
Python Notebooks ⭐ 33
Scientific Computing with Python for beginners.
most recent commit 2 months ago
Pandas To Postgres ⭐ 33
Copy Pandas DataFrames and HDF5 files to PostgreSQL database
most recent commit 2 years ago
Core ⭐ 33
The core source repository for the Cherab project.
most recent commit 2 months ago
Prmon ⭐ 33
Standalone monitor for process resource consumption
most recent commit 4 months ago
Pyret ⭐ 31
Python tools for analysis of neurophysiology data
most recent commit 4 years ago
Satmad ⭐ 31
Satellite Mission Analysis and Design
most recent commit 3 months ago
Pyrates ⭐ 30
Open-source, graph-based Python code generator and analysis toolbox for dynamical systems (pre-implemented and custom models). Most pre-implemented models belong to the family of neural population models.
most recent commit a month ago
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