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The Top 16 Python Pdb Protein Structure Open Source Projects

Open source projects categorized as Python Pdb Protein Structure
Categories > Protein Structure
Molecularnodes ⭐ 729
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
dependent packages 1total releases 5most recent commit 3 months agopypi molecularnodes} Downloads
Plip ⭐ 320
Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Adasme et al. (2021), https://doi.org/10.1093/nar/gkab294
dependent packages 1total releases 25most recent commit 8 months agopypi plip} Downloads
Pypdb ⭐ 258
A Python API for the RCSB Protein Data Bank (PDB)
dependent packages 5total releases 18most recent commit 9 months agopypi pypdb} Downloads
Deeplytough ⭐ 115
DeeplyTough: Learning Structural Comparison of Protein Binding Sites
most recent commit 2 years ago
Proteinsecondarystructure Cnn ⭐ 93
Protein Secondary Structure predictor using Convolutional Neural Networks
most recent commit 9 months ago
Ramanet ⭐ 31
Preforms De novo protein design using machine learning and PyRosetta to generate a novel protein structure
most recent commit 2 years ago
Pdbcolor ⭐ 24
Python code to color a PDB structure based on parameters from a multiple sequence alignment
most recent commit 8 months ago
Glycosylator ⭐ 23
Framework for the rapid modeling glycans and glycoproteins.
most recent commit 7 months ago
Jupyterlabpymolpysnips ⭐ 14
Python snippets for PyMOL to be run in Jupyterlab via the jupyterlab-snippets-multimenus extension.
most recent commit 6 months ago
Ramachandraw ⭐ 12
Ramachandran plotting tool
total releases 5most recent commit a year ago
Allopred ⭐ 11
Predict allosteric pockets on proteins
most recent commit 2 years ago
Pose ⭐ 10
A bare metal Python library for building and manipulating protein molecular structures
most recent commit 5 months ago
Pdb2uniprot ⭐ 7
Convert PDB residues to their Uniprot equivalents
most recent commit 4 years ago
Python_scripts ⭐ 7
scripts for parsing PDB, fasta, and GO
most recent commit 3 years ago
Rfold ⭐ 5
a set of classes and submodules to build, manipulate and analyse three-dimensional protein structures.
most recent commit 5 years ago
Biographs ⭐ 5
Python class to easily deal with protein networks.
total releases 1most recent commit 4 years ago
The 3 Most Depended On Python Pdb Protein Structure Open Source Projects
Pypdb ⭐ 258
A Python API for the RCSB Protein Data Bank (PDB)
dependent packages 5total releases 18latest release July 24, 2023most recent commit 9 months agopypi pypdb} Downloads
Molecularnodes ⭐ 729
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
dependent packages 1total releases 5latest release December 05, 2023most recent commit 3 months agopypi molecularnodes} Downloads
The 5 Latest Releases In Python Pdb Protein Structure Open Source Projects
Molecularnodes ⭐ 729
Toolbox for molecular animations in Blender, powered by Geometry Nodes.
dependent packages 1total releases 5latest release December 05, 2023most recent commit 3 months agopypi molecularnodes} Downloads
Pypdb ⭐ 258
A Python API for the RCSB Protein Data Bank (PDB)
dependent packages 5total releases 18latest release July 24, 2023most recent commit 9 months agopypi pypdb} Downloads
Ramachandraw ⭐ 12
Ramachandran plotting tool
total releases 5latest release December 03, 2020most recent commit a year ago
Biographs ⭐ 5
Python class to easily deal with protein networks.
total releases 1latest release January 02, 2020most recent commit 4 years ago
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