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The Top 23 Ga4gh Open Source Projects

Open source projects categorized as Ga4gh
Categories > Ga4gh
Cromwell ⭐ 944
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
total releases 37most recent commit 5 months ago
Funnel ⭐ 117
Funnel is a toolkit for distributed task execution via a simple, standard API.
total releases 1most recent commit 6 months ago
Benchmarking Tools ⭐ 110
Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls
most recent commit 4 years ago
Ga4gh Server ⭐ 95
Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
total releases 18most recent commit 6 years ago
Workflow Execution Service Schemas ⭐ 82
The WES API is a standard way to run and manage portable workflows.
most recent commit 2 months ago
Phenopacket Schema ⭐ 64
Repository for the GA4GH phenopacket schema
dependent packages 7total releases 3most recent commit a year agopypi phenopackets} Downloads
Vrs Python ⭐ 44
GA4GH Variation Representation Python Implementation
dependent packages 7total releases 48most recent commit 5 months agopypi ga4gh.vrs} Downloads
Tesk ⭐ 38
GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes
most recent commit 3 months ago
Specification ⭐ 32
GA4GH Beacon specification.
most recent commit a year ago
Tool Registry Service Schemas ⭐ 30
APIs for discovering genomics tools, their metadata and their containers
most recent commit 9 months ago
Cwl Wes ⭐ 15
Trigger CWL workflows via GA4GH WES and TES
most recent commit 5 months ago
Crypt4gh ⭐ 13
GA4GH cryptographic tools
dependent packages 2total releases 6most recent commit 6 months agopypi crypt4gh} Downloads
Cloud Interop Testing ⭐ 9
Interoperable execution of workflows using GA4GH APIs
most recent commit 5 years ago
Beacon Python ⭐ 8
Python-based GA4GH Beacon API Server
most recent commit 8 months ago
Pedigree ⭐ 7
Repository for the family history/pedigree project
most recent commit a year ago
Refget Compliance Suite ⭐ 7
Repository for the Google Summer of Code for the Reference Retrieval API
total releases 10most recent commit a year ago
Ga4gh Beacon.github.io ⭐ 7
Website of ELIXIR Beacon - A GA4GH Driver Project
most recent commit 9 months ago
Tesk Api ⭐ 6
GA4GH TES API Service that translates tasks into Kubernetes Batch API calls
most recent commit 8 months ago
Phenopacket Tools ⭐ 6
An app and library for building, conversion, and validation of GA4GH Phenopackets.
total releases 6most recent commit a year ago
Crypt4gh ⭐ 6
Crypt4GH standard implementation
dependent packages 4total releases 32most recent commit 5 months ago
Bioapi Examples ⭐ 6
Code examples for working with web based bioinformatics APIs
most recent commit 7 years ago
Beacon Network ⭐ 6
Beacon Network APIs
most recent commit 8 months ago
Protes ⭐ 5
Proxy service for injecting middleware into GA4GH TES requests
most recent commit 7 months ago
The 4 Most Depended On Ga4gh Open Source Projects
Phenopacket Schema ⭐ 64
Repository for the GA4GH phenopacket schema
dependent packages 7total releases 3latest release October 18, 2023most recent commit a year agopypi phenopackets} Downloads
Vrs Python ⭐ 44
GA4GH Variation Representation Python Implementation
dependent packages 7total releases 48latest release November 09, 2023most recent commit 5 months agopypi ga4gh.vrs} Downloads
Crypt4gh ⭐ 6
Crypt4GH standard implementation
dependent packages 4total releases 32latest release October 10, 2023most recent commit 5 months ago
Crypt4gh ⭐ 13
GA4GH cryptographic tools
dependent packages 2total releases 6latest release August 10, 2022most recent commit 6 months agopypi crypt4gh} Downloads
The 9 Latest Releases In Ga4gh Open Source Projects
Vrs Python ⭐ 44
GA4GH Variation Representation Python Implementation
dependent packages 7total releases 48latest release November 09, 2023most recent commit 5 months agopypi ga4gh.vrs} Downloads
Phenopacket Schema ⭐ 64
Repository for the GA4GH phenopacket schema
dependent packages 7total releases 3latest release October 18, 2023most recent commit a year agopypi phenopackets} Downloads
Crypt4gh ⭐ 6
Crypt4GH standard implementation
dependent packages 4total releases 32latest release October 10, 2023most recent commit 5 months ago
Funnel ⭐ 117
Funnel is a toolkit for distributed task execution via a simple, standard API.
total releases 1latest release May 15, 2023most recent commit 6 months ago
Phenopacket Tools ⭐ 6
An app and library for building, conversion, and validation of GA4GH Phenopackets.
total releases 6latest release April 25, 2023most recent commit a year ago
Crypt4gh ⭐ 13
GA4GH cryptographic tools
dependent packages 2total releases 6latest release August 10, 2022most recent commit 6 months agopypi crypt4gh} Downloads
Ga4gh Server ⭐ 95
Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
total releases 18latest release December 15, 2021most recent commit 6 years ago
Refget Compliance Suite ⭐ 7
Repository for the Google Summer of Code for the Reference Retrieval API
total releases 10latest release October 08, 2018most recent commit a year ago
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