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The Top 12 Workflow Bioinformatics Wdl Open Source Projects

Open source projects categorized as Workflow Bioinformatics Wdl
Categories > Data Processing > Bioinformatics
Categories > Wdl
Cromwell ⭐ 944
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
total releases 37most recent commit 3 months ago
Wdl ⭐ 706
Workflow Description Language - Specification and Implementations
total releases 20most recent commit 3 months ago
Dockstore ⭐ 113
Our VM/Docker sharing infrastructure and management component
most recent commit 3 months ago
Tasks ⭐ 78
A collection of reusable WDL tasks. Category:Other
most recent commit 8 months ago
Cromshell ⭐ 51
CLI for interacting with Cromwell servers
total releases 2most recent commit 6 months ago
Janis ⭐ 39
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
dependent packages 7total releases 62most recent commit 8 months agopypi janis-pipelines.core} Downloads
Oliver ⭐ 36
An opinionated Cromwell orchestration manager.
total releases 27most recent commit a year ago
Workflows ⭐ 28
Bioinformatics workflows developed for and used on the St. Jude Cloud project.
most recent commit 3 months ago
Wdldoc ⭐ 26
Create WDL documentation using Markdown.
total releases 14most recent commit a year ago
Hotsub ⭐ 23
Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources
total releases 22most recent commit 5 years ago
Pumbaa ⭐ 14
Command-line interface for Cromwell server
total releases 25most recent commit 5 months ago
Clihelpparser ⭐ 13
Library for reading the output from CLI help commands, and generating machine readable schemas (CWL etc)
most recent commit 3 years ago
The 8 Latest Releases In Workflow Bioinformatics Wdl Open Source Projects
Cromshell ⭐ 51
CLI for interacting with Cromwell servers
total releases 2latest release October 17, 2023most recent commit 6 months ago
Janis ⭐ 39
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
dependent packages 7total releases 62latest release August 30, 2023most recent commit 8 months agopypi janis-pipelines.core} Downloads
Pumbaa ⭐ 14
Command-line interface for Cromwell server
total releases 25latest release June 06, 2023most recent commit 5 months ago
Oliver ⭐ 36
An opinionated Cromwell orchestration manager.
total releases 27latest release November 20, 2021most recent commit a year ago
Wdldoc ⭐ 26
Create WDL documentation using Markdown.
total releases 14latest release September 10, 2021most recent commit a year ago
Wdl ⭐ 706
Workflow Description Language - Specification and Implementations
total releases 20latest release January 25, 2016most recent commit 3 months ago
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