Project Name	Stars	Repos Using This	Packages Using This	Most Recent Commit	Total Releases	Latest Release	Open Issues	License	Language
Toil	860	19	12	3 months ago	528	July 27, 2023	407	apache-2.0	Python
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
Pgap	263			3 months ago			15	other	Common Workflow Language
NCBI Prokaryotic Genome Annotation Pipeline
Analysis Workflows	99			10 months ago			89	mit	Common Workflow Language
Open workflow definitions for genomic analysis from MGI at WUSM.
Emg Viral Pipeline	98			7 months ago			19	apache-2.0	Python
VIRify: detection of phages and eukaryotic viruses from metagenomic and metatranscriptomic assemblies
Tibanna	68		1	3 months ago	280	October 06, 2023	25	mit	Python
Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.
Janis	39	2	7	8 months ago	62	August 30, 2023	16	gpl-3.0	Python
[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
Nlppln	33	1		5 years ago	6	January 08, 2019	11	apache-2.0	Python
NLP pipeline software using common workflow language
Pipeline V5	19			8 months ago			4	apache-2.0	HTML
This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
Ebi Metagenomics Cwl	19			3 years ago			12		Common Workflow Language
This repository contains the CWL description of the EBI Metagenomics pipeline
Chiron	16			5 years ago				mit	C++
Tools and utilities for running Dockerized metagenomics tools in the Cloud

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A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

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Tibanna ⭐ 68

Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

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Janis ⭐ 39

[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows

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Nlppln ⭐ 33

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Pipeline V5 ⭐ 19

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Ebi Metagenomics Cwl ⭐ 19

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Chiron ⭐ 16

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most recent commit 5 years ago

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Janis vs Toil

Janis vs Pgap

Janis vs Analysis Workflows

Janis vs Emg Viral Pipeline

Janis vs Tibanna

Janis vs Nlppln

Janis vs Pipeline V5

Janis vs Ebi Metagenomics Cwl

Janis vs Chiron

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