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The Top 23 Bioconda Open Source Projects

Open source projects categorized as Bioconda
Categories > Bioconda
Hlama ⭐ 11
Simple matching of HTS samples based on HLA typing
most recent commit 7 years ago
Hundo ⭐ 11
💯 Snakemake-based amplicon processing protocol for 16S and ITS sequences.
total releases 31most recent commit 5 years ago
Ng Meta Profiler ⭐ 10
Profiler for metagenomics based on NGLess
most recent commit 3 years ago
Containers Rules Manuscript ⭐ 10
Recommendations to contenarized your bioinformatics software
most recent commit 6 years ago
Neptune ⭐ 9
Neptune: Genomic Signature Discovery
most recent commit 7 years ago
Prosic2 ⭐ 9
Version 2 of the PROSIC caller for somatic variants.
most recent commit 5 years ago
Star Seqr ⭐ 9
RNA Fusion Detection and Quantification
total releases 24most recent commit 6 years ago
Mzml2isa ⭐ 9
Parser to get meta information from mzML file and parse relevant information to a ISA-Tab structure
most recent commit 2 years ago
Bio598_tutorial ⭐ 8
A hands-on tutorial introducing users to reproducible genome reassembly and variant calling
most recent commit 7 years ago
Gedmatch Tools ⭐ 8
Tools and Python API for GEDMatch Genesis (https://genesis.gedmatch.com)
most recent commit 2 years ago
Edu ⭐ 7
BioContainers Documentation.
most recent commit a year ago
Bcbio Conda ⭐ 7
Deprecated conda recipes for bcbio python code and dependencies -- migrated to bioconda
most recent commit 8 years ago
Mzml2isa Galaxy ⭐ 7
mzml2isa for galaxy
most recent commit a year ago
Bioconda Primedrpa ⭐ 7
most recent commit 2 years ago
Carnac Lr ⭐ 7
most recent commit 5 years ago
Mobster ⭐ 7
For more details about Mobster please see
most recent commit 2 years ago
Disty ⭐ 6
Disty McMatrixface - compute a distance matrix from a core genome alignment file
most recent commit 7 years ago
Tangle Resolution ⭐ 6
most recent commit 3 years ago
Dimspy ⭐ 6
Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data
total releases 6most recent commit 4 years ago
Cellrank_notebooks ⭐ 6
Tutorials and examples for CellRank.
most recent commit 7 months ago
Blr ⭐ 6
most recent commit 8 months ago
Pathwaymatcher_dev ⭐ 6
PathwayMatcher is a free, open-source software to search for pathways related to a list of proteins in Reactome. This repository is the development repository. For the latest version see: https://github.com/PathwayAnalysisPlatform/Pathway
most recent commit 5 years ago
Quasitools ⭐ 6
Quasitools is a collection of tools for analysing viral quasispecies data.
most recent commit 4 years ago
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