Awesome Open Source
Search
Programming Languages
Languages
All Categories
Categories
About

The Top 23 Python Bids Open Source Projects

Open source projects categorized as Python Bids
Bids Specification ⭐ 235
Brain Imaging Data Structure (BIDS) Specification
dependent packages 1total releases 8most recent commit 3 months agopypi bidsschematools} Downloads
Pybids ⭐ 199
Python tools for querying and manipulating BIDS datasets.
dependent packages 69total releases 48most recent commit 4 months agopypi pybids} Downloads
Mne Bids ⭐ 110
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
dependent packages 10total releases 16most recent commit 3 months agopypi mne-bids} Downloads
Bidscoin ⭐ 110
BIDScoin converts your source-level neuroimaging data to BIDS
total releases 32most recent commit 3 months ago
Mne Bids Pipeline ⭐ 106
Automatically process entire electrophysiological datasets using MNE-Python.
most recent commit 3 months ago
Teneto ⭐ 78
Temporal Network Tools
dependent packages 2total releases 24most recent commit 5 months agopypi teneto} Downloads
Dmriprep ⭐ 61
dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
total releases 8most recent commit 5 months ago
Phys2bids ⭐ 56
Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!
dependent packages 2total releases 28most recent commit 4 months agopypi phys2bids} Downloads
Halfpipe ⭐ 56
ENIGMA HALFpipe is a user-friendly software that facilitates reproducible analysis of fMRI data
most recent commit 3 months ago
Remodnav ⭐ 44
Robust Eye Movement Detection for Natural Viewing
dependent packages 1total releases 8most recent commit 10 months agopypi remodnav} Downloads
Fmriflows ⭐ 42
fmriflows is a consortium of many (dependent) fMRI analysis pipelines, including anatomical and functional pre-processing, univariate 1st and 2nd-level analysis, as well as multivariate pattern analysis.
most recent commit 2 years ago
Samri ⭐ 39
Small Animal Magnetic Resonance Imaging via Python.
most recent commit 7 months ago
Connectomemapper3 ⭐ 39
Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.
total releases 5most recent commit 2 years ago
Freesurfer ⭐ 35
BIDS app wrapping recon-all from FreeSurfer
most recent commit 5 months ago
Hcppipelines ⭐ 30
A BIDS App for minimal preprocessing using the HCP Pipelines
most recent commit 5 months ago
Sdc Bids Smri ⭐ 20
Structural Neuroimaging Analysis in Python
most recent commit 5 months ago
Sdc Bids Intromri ⭐ 19
Introduction to MRI and BIDS
most recent commit 2 years ago
Pet2bids ⭐ 17
PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side file like .e.g excel sheets
most recent commit 3 months ago
Sdc Bids Dmri ⭐ 16
Introduction to dMRI
most recent commit 5 months ago
Example ⭐ 16
This an example app that can serve as a template.
most recent commit 7 months ago
Bids2nda ⭐ 15
A conversion tool for creating NDA compatible metadata representation from BIDS datasets.
most recent commit 9 months ago
Snakebids ⭐ 14
Snakemake + BIDS
most recent commit 3 months ago
Cpac ⭐ 14
BIDS Application for the Configurable Pipeline for the Analysis of Connectomes (C-PAC)
most recent commit 5 months ago
The 6 Most Depended On Python Bids Open Source Projects
Pybids ⭐ 199
Python tools for querying and manipulating BIDS datasets.
dependent packages 69total releases 48latest release November 30, 2023most recent commit 4 months agopypi pybids} Downloads
Mne Bids ⭐ 110
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
dependent packages 10total releases 16latest release November 16, 2023most recent commit 3 months agopypi mne-bids} Downloads
Teneto ⭐ 78
Temporal Network Tools
dependent packages 2total releases 24latest release February 17, 2021most recent commit 5 months agopypi teneto} Downloads
Remodnav ⭐ 44
Robust Eye Movement Detection for Natural Viewing
dependent packages 1total releases 8latest release April 25, 2019most recent commit 10 months agopypi remodnav} Downloads
Bids Specification ⭐ 235
Brain Imaging Data Structure (BIDS) Specification
dependent packages 1total releases 8latest release September 28, 2023most recent commit 3 months agopypi bidsschematools} Downloads
The 10 Latest Releases In Python Bids Open Source Projects
Pybids ⭐ 199
Python tools for querying and manipulating BIDS datasets.
dependent packages 69total releases 48latest release November 30, 2023most recent commit 4 months agopypi pybids} Downloads
Mne Bids ⭐ 110
MNE-BIDS is a Python package that allows you to read and write BIDS-compatible datasets with the help of MNE-Python.
dependent packages 10total releases 16latest release November 16, 2023most recent commit 3 months agopypi mne-bids} Downloads
Bidscoin ⭐ 110
BIDScoin converts your source-level neuroimaging data to BIDS
total releases 32latest release October 30, 2023most recent commit 3 months ago
Bids Specification ⭐ 235
Brain Imaging Data Structure (BIDS) Specification
dependent packages 1total releases 8latest release September 28, 2023most recent commit 3 months agopypi bidsschematools} Downloads
Bidsmreye ⭐ 6
BIDS app using deepMReye to decode eye motion for fMRI time series data.
total releases 4latest release January 26, 2023most recent commit 4 months ago
Teneto ⭐ 78
Temporal Network Tools
dependent packages 2total releases 24latest release February 17, 2021most recent commit 5 months agopypi teneto} Downloads
Categories
Privacy | About | Terms | Follow Us On Twitter

Downloads, Dependent Repos, Dependent Packages, Total Releases, Latest Releases data powered by Libraries.io.

Copyright 2018-2024 Awesome Open Source.  All rights reserved.