The Top 88 Bayesian Inference Open Source Projects

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Computer Science 📦 80

Configuration Management 📦 42

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The Top 88 Bayesian Inference Open Source Projects

Categories > Machine Learning > Bayesian Inference

Numpy Ml ⭐ 9,664

Machine learning, in numpy

Deep universal probabilistic programming with Python and PyTorch

Pymc3 ⭐ 5,689

Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Aesara

Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details.

Zhusuan ⭐ 2,027

A probabilistic programming library for Bayesian deep learning, generative models, based on Tensorflow

Neural Tangents ⭐ 1,387

Fast and Easy Infinite Neural Networks in Python

Infer ⭐ 1,344

Infer.NET is a framework for running Bayesian inference in graphical models

Turing.jl ⭐ 1,184

Bayesian inference with probabilistic programming.

Causalnex ⭐ 1,071

A Python library that helps data scientists to infer causation rather than observing correlation.

Numpyro ⭐ 960

Probabilistic programming with NumPy powered by JAX for autograd and JIT compilation to GPU/TPU/CPU.

Resources ⭐ 958

PyMC3 educational resources

Bayesian Neural Networks ⭐ 927

Pytorch implementations of Bayes By Backprop, MC Dropout, SGLD, the Local Reparametrization Trick, KF-Laplace, SG-HMC and more

brms R package for Bayesian generalized multivariate non-linear multilevel models using Stan

Pytorch Bayesiancnn ⭐ 806

Bayesian Convolutional Neural Network with Variational Inference based on Bayes by Backprop in PyTorch.

Bda_py_demos ⭐ 789

Bayesian Data Analysis demos for Python

Resources to learn more about Machine Learning and Artificial Intelligence

RStan, the R interface to Stan

Probabilistic_robotics ⭐ 745

solution of exercises of the book "probabilistic robotics"

Dsge.jl ⭐ 634

Solve and estimate Dynamic Stochastic General Equilibrium models (including the New York Fed DSGE)

Dbda Python ⭐ 511

Doing Bayesian Data Analysis, 2nd Edition (Kruschke, 2015): Python/PyMC3 code

Bayesian Stats Modelling Tutorial ⭐ 487

How to do Bayesian statistical modelling using numpy and PyMC3

Bayesian Analysis Recipes ⭐ 481

A collection of Bayesian data analysis recipes using PyMC3

Bda_r_demos ⭐ 412

Bayesian Data Analysis demos for R

Variational autoencoders for collaborative filtering

Statistical_rethinking_with_brms_ggplot2_and_the_tidyverse ⭐ 351

The bookdown version lives here: https://bookdown.org/content/3890

Bayadera ⭐ 343

High-performance Bayesian Data Analysis on the GPU in Clojure

Pyvarinf ⭐ 320

Python package facilitating the use of Bayesian Deep Learning methods with Variational Inference for PyTorch

Rstanarm ⭐ 288

rstanarm R package for Bayesian applied regression modeling

Soss.jl ⭐ 254

Probabilistic programming via source rewriting

Stheno.jl ⭐ 244

Probabilistic Programming with Gaussian processes in Julia

Master Thesis Bayesiancnn ⭐ 223

Master Thesis on Bayesian Convolutional Neural Network using Variational Inference

Collection of Monte Carlo (MC) and Markov Chain Monte Carlo (MCMC) algorithms applied on simple examples.

Probabilistic Models ⭐ 217

Collection of probabilistic models and inference algorithms

Dynesty ⭐ 216

Dynamic Nested Sampling package for computing Bayesian posteriors and evidences

ELFI - Engine for Likelihood-Free Inference

Bayesianrecurrentnn ⭐ 201

Implementation of Bayesian Recurrent Neural Networks by Fortunato et. al

Dynamichmc.jl ⭐ 173

Implementation of robust dynamic Hamiltonian Monte Carlo methods (NUTS) in Julia.

Shinystan ⭐ 172

shinystan R package and ShinyStan GUI

Simulation-based inference in PyTorch

Bayesian Evolutionary Analysis by Sampling Trees

Rethinking Tensorflow Probability ⭐ 157

Statistical Rethinking (2nd Ed) with Tensorflow Probability

Statsexpressions ⭐ 156

Expressions and dataframes with statistical details 📉 📜🔣✅

Celeste.jl ⭐ 143

Scalable inference for a generative model of astronomical images

Particles ⭐ 142

Sequential Monte Carlo in python

Survival Analysis Using Deep Learning ⭐ 140

This repository contains morden baysian statistics and deep learning based research articles , software for survival analysis

Mrbayes ⭐ 137

MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:

Glmm In Python ⭐ 133

Generalized linear mixed-effect model in Python

Libcluster ⭐ 132

An extensible C++ library of Hierarchical Bayesian clustering algorithms, such as Bayesian Gaussian mixture models, variational Dirichlet processes, Gaussian latent Dirichlet allocation and more.

Aboleth ⭐ 126

A bare-bones TensorFlow framework for Bayesian deep learning and Gaussian process approximation

TAPAS - Translational Algorithms for Psychiatry-Advancing Science

Variational Bayesian Monte Carlo (VBMC) algorithm for posterior and model inference in MATLAB

Exoplanet ⭐ 123

Fast & scalable MCMC for all your exoplanet needs!

Bayesian Coherent Point Drift (BCPD/BCPD++); Source Code Available

Rethinking Pyro ⭐ 118

Statistical Rethinking with PyTorch and Pyro

A Nice Mc ⭐ 114

Code for "A-NICE-MC: Adversarial Training for MCMC"

BOPP: Bayesian Optimization for Probabilistic Programs

Pymc3_vs_pystan ⭐ 111

Personal project to compare hierarchical linear regression in PyMC3 and PyStan, as presented at http://pydata.org/london2016/schedule/presentation/30/ video: https://www.youtube.com/watch?v=Jb9eklfbDyg

Gpstuff ⭐ 107

GPstuff - Gaussian process models for Bayesian analysis

A qualitative probabilistic programming language based on ranking theory

The base NIMBLE package for R

Bayesian_cnn ⭐ 98

Bayes by Backprop implemented in a CNN in PyTorch

Probflow ⭐ 97

A Python package for building Bayesian models with TensorFlow or PyTorch

This project has moved to https://git.dynare.org/Dynare/dynare

Mxfusion ⭐ 95

Modular Probabilistic Programming on MXNet

Bayesian Cognitive Modeling In Pymc3 ⭐ 93

PyMC3 codes of Lee and Wagenmakers' Bayesian Cognitive Modeling - A Pratical Course

Paramonte ⭐ 92

ParaMonte: Plain Powerful Parallel Monte Carlo and MCMC Library for Python, MATLAB, Fortran, C++, C.

Pymc Example Project ⭐ 90

Example PyMC3 project for performing Bayesian data analysis using a probabilistic programming approach to machine learning.

Bayesloop ⭐ 89

Probabilistic programming framework that facilitates objective model selection for time-varying parameter models.

Pumas.jl ⭐ 84

Pharmaceutical Modeling and Simulation for Nonlinear Mixed Effects (NLME), Quantiative Systems Pharmacology (QsP), Physiologically-Based Pharmacokinetics (PBPK) models mixed with machine learning

A Bayesian Analysis Toolkit in Julia

NIPS 2017: ALICE: Towards Understanding Adversarial Learning for Joint Distribution Matching

Projpred ⭐ 79

Projection predictive variable selection

Paper Reading ⭐ 67

Blackjax ⭐ 66

BlackJAX is a sampling library designed for ease of use, speed and modularity.

Bayestyper ⭐ 65

A method for variant graph genotyping based on exact alignment of k-mers

Deep Learning over PyTorch

Python package for learning the graphical structure of Bayesian networks, parameter learning, inference and sampling methods.

Diffusive Nested Sampling

Hmm_for_autonomous_driving ⭐ 40

🎓 Educational application of Hidden Markov Model to Autonomous Driving 🚕🚙🚗

Distributed Bayesian Entity Resolution in Apache Spark

C++ template library for probabilistic programming

Ipynotebook_machinelearning ⭐ 27

This contains a number of IP[y]: Notebooks that hopefully give a light to areas of bayesian machine learning.

A resource list for causality in statistics, data science and physics

Pycurious ⭐ 23

Python package for computing the Curie depth from the magnetic anomaly

Scikit Stan ⭐ 22

A high-level Bayesian analysis API written in Python

Rhat_ess ⭐ 19

Rank-normalization, folding, and localization: An improved R-hat for assessing convergence of MCMC

Ggdistribute ⭐ 16

ggplot2 extension for plotting distributions

Bayesflare ⭐ 6

A python module to detect stellar flares using Bayesian model comparison

1-88 of 88 projects

Advertising 📦 10

Application Programming Interfaces 📦 124

Applications 📦 192

Artificial Intelligence 📦 78

Blockchain 📦 73

Build Tools 📦 113

Cloud Computing 📦 80

Code Quality 📦 28

Collaboration 📦 32

Command Line Interface 📦 49

Community 📦 83

Companies 📦 60

Compilers 📦 63

Computer Science 📦 80

Configuration Management 📦 42

Content Management 📦 175

Control Flow 📦 213

Data Formats 📦 78

Data Processing 📦 276

Data Storage 📦 135

Economics 📦 64

Frameworks 📦 215

Graphics 📦 110

Hardware 📦 152

Integrated Development Environments 📦 49

Learning Resources 📦 166

Libraries 📦 129

Lists Of Projects 📦 22

Machine Learning 📦 347

Mapping 📦 64

Marketing 📦 15

Mathematics 📦 55

Messaging 📦 98

Networking 📦 315

Operating Systems 📦 89

Operations 📦 121

Package Managers 📦 55

Programming Languages 📦 245

Runtime Environments 📦 100

Science 📦 42

Security 📦 396

Social Media 📦 27

Software Architecture 📦 72

Software Development 📦 72

Software Performance 📦 58

Software Quality 📦 133

Text Editors 📦 49

Text Processing 📦 136

User Interface 📦 330

User Interface Components 📦 514

Version Control 📦 30

Virtualization 📦 71

Web Browsers 📦 42

Web Servers 📦 26

Web User Interface 📦 210