Plot_coverage
Python package to generate plots from coverage reports
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Kat | 168 | a year ago | 30 | gpl-3.0 | C++ | |||||
| The K-mer Analysis Toolkit (KAT) contains a number of tools that analyse and compare K-mer spectra. | ||||||||||
| Cnvpytor | 132 | 5 months ago | 10 | April 22, 2022 | 44 | mit | Python | |||
| a python extension of CNVnator -- a tool for CNV analysis from depth-of-coverage by mapped reads | ||||||||||
| Covviz | 42 | 2 years ago | 17 | July 27, 2021 | mit | HTML | ||||
| Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata | ||||||||||
| Wiggleplotr | 28 | 2 years ago | 7 | apache-2.0 | R | |||||
| A small R package to make sequencing read coverage plots in R. | ||||||||||
| Plot_keras_history | 15 | a year ago | mit | Python | ||||||
| A simple python package to print a keras NN training history. | ||||||||||
| Cli Tools | 13 | 2 years ago | 5 | other | Python | |||||
| IoT-LAB CLI tools | ||||||||||
| Amplicon_coverage_plot | 12 | a year ago | 10 | January 12, 2023 | 1 | gpl-3.0 | HTML | |||
| interactive barplot for amplicon sequencing | ||||||||||
| Spliceclust | 8 | 4 years ago | mit | R | ||||||
| visualization tools for exon/junction coverage | ||||||||||
| Genome_coverage_plotter | 8 | 9 years ago | 1 | mit | Python | |||||
| Simple script to generate whole-genome coverage plots | ||||||||||
| Cropanalysis | 7 | 4 years ago | Jupyter Notebook | |||||||
| A jupyter notebook with crop analysis algorithms utilizing digital elevation models and multi-spectral imagery (R-G-B-NIR-Rededge-Thermal) | ||||||||||
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