Public Bioinformatics Datasets
Publicly available dataset for bioinformatics and integrative -omics research
| Project Name | Stars | Downloads | Repos Using This | Packages Using This | Most Recent Commit | Total Releases | Latest Release | Open Issues | License | Language |
|---|---|---|---|---|---|---|---|---|---|---|
| Tdc | 889 |  | 4 | 5 months ago | 32 | January 27, 2023 | 34 | mit | Jupyter Notebook | |
| Therapeutics Data Commons: Artificial Intelligence Foundation for Therapeutic Science | ||||||||||
| Primekg | 269 | 5 months ago | 2 | mit | Jupyter Notebook | |||||
| Precision Medicine Knowledge Graph (PrimeKG) | ||||||||||
| Scgen | 215 |  | 2 | 8 months ago | 9 | April 25, 2022 | 16 | gpl-3.0 | Python | |
| Single cell perturbation prediction | ||||||||||
| Deepecg | 187 | a year ago | mit | Python | ||||||
| ECG classification programs based on ML/DL methods | ||||||||||
| Proteinflow | 151 | 5 months ago | bsd-3-clause | Python | ||||||
| Versatile computational pipeline for processing protein structure data for deep learning applications. | ||||||||||
| Harmonypy | 116 |  | 14 | a year ago | 8 | November 23, 2022 | 2 | gpl-3.0 | Python | |
| 🎼 Integrate multiple high-dimensional datasets with fuzzy k-means and locally linear adjustments. | ||||||||||
| Globalbioticinteractions | 114 | 4 months ago | 314 | gpl-3.0 | Java | |||||
| Global Biotic Interactions provides access to existing species interaction datasets | ||||||||||
| Swne | 100 | 10 months ago | 4 | bsd-3-clause | R | |||||
| Similarity Weighted Nonnegative Embedding (SWNE), a method for visualizing high dimensional datasets | ||||||||||
| Biojupies | 94 | 2 years ago | 67 | other | HTML | |||||
| Automated generation of tailored bioinformatics Jupyter Notebooks via a user interface. | ||||||||||
| Bio | 86 | 1 | 13 | 5 months ago | 32 | November 11, 2023 | mit | Go | ||
| A lightweight and high-performance bioinformatics package in Golang | ||||||||||
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