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Search results for zarr
zarr
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41 search results found
Zarr Python
⭐
1,336
An implementation of chunked, compressed, N-dimensional arrays for Python.
Tifffile
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436
Read and write TIFF files. Forked from https://pypi.org/project/tifffile
Viv
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245
Library for multiscale visualization of high-resolution multiplexed bioimaging data on the web. Directly renders Zarr and OME-TIFF.
Arco Era5
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132
Recipes for reproducing Analysis-Ready & Cloud Optimized (ARCO) ERA5 datasets.
Ome Zarr Py
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126
Implementation of next-generation file format (NGFF) specifications for storing bioimaging data in the cloud.
Vitessce
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124
Vitessce is a visual integration tool for exploration of spatial single-cell experiments.
Zarr.js
⭐
113
Javascript implementation of Zarr
Xarray Beam
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110
Distributed Xarray with Apache Beam
Pangeo Forge Recipes
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108
Python library for building Pangeo Forge recipes.
Z5
⭐
98
Lightweight C++ and Python interface for datasets in zarr and N5 format
Vizarr
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89
A minimal, purely client-side program for viewing Zarr-based images with Viv & ImJoy.
Echopype
⭐
80
Enabling interoperability and scalability in ocean sonar data analysis
Cubed
⭐
80
Bounded-memory serverless distributed N-dimensional array processing
Zarr Specs
⭐
71
Zarr core protocol for storage and retrieval of N-dimensional typed arrays
Hagelslag
⭐
64
Hagelslag supports segmentation and tracking of weather fields and scalable verification, including performance diagrams and reliability diagrams.
Zen3geo
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56
The 🌏 data science library you've been waiting for~
Sat Extractor
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52
Extract Satellite Imagery from public constellations at scale
Mesogeos
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29
A multi-purpose dataset for data-driven wildfire modeling in the Mediterranean. Deep Learning models for wildfire modeling, e.g. danger forecasting, burned area prediction, etc
Cesm Lens Aws
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29
Examples of analysis of CESM LENS data publicly available on Amazon S3 (us-west-2 region) using xarray and dask
Zarrita.js
⭐
26
A JavaScript toolkit for working with chunked, compressed, n-dimensional arrays
Zarr Illustrations Falk 2022
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26
Illustrations created by Henning Falk for the Zarr community
Climetlab S2s Ai Challenge
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26
climetlab plugin to access subseasonal to seasonal (S2S) forecasts for the s2s-ai-challenge
Mdio Python
⭐
24
Cloud native, scalable storage engine for various types of energy data.
Rarr
⭐
23
A simple native R reader for Zarr Arrays
Xtensor Zarr
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23
Implementation of the Zarr core protocol (version 2 and 3) based on xtensor.
Napari Ome Zarr
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23
A napari plugin for zarr backed OME-NGFF images
Deepicedrain
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19
Mapping and monitoring deep subglacial water activity in Antarctica using remote sensing and machine learning, with ICESat-2!
Omero Ms Zarr
⭐
16
Experimental micro-service for implementing the Zarr spec over HTTP
Pizzarr
⭐
16
Slice into Zarr arrays in R 🍕
Omero Cli Zarr
⭐
14
Tensordb
⭐
13
Datastore for Tensors based on Xarray and Zarr
N5 Ij
⭐
11
ImageJ convenience layer for N5
Batchconvert
⭐
10
A nextflow based tool that wraps bfconvert and bioformats2raw to convert image data collections to OME-TIFF and OME-Zarr, respectively, in a parallelised manner.
Itslive Py
⭐
10
Python client for ITSLIVE glacier ice velocities.
Zcollection
⭐
10
Python library allowing to manipulate data splited into a collection of groups stored in Zarr format.
Catalog To Xpublish
⭐
10
This repository enables one to spin-up a FastAPI/Xpublish server from an Intake or STAC catalog.
Ndarray.scala
⭐
9
N-dimensional arrays, with Zarr and HDF5 integrations
Gribscan
⭐
8
Build indices and datasets from grib files.
Cngi_prototype
⭐
6
Prototype Development of CNGI
Zappy
⭐
6
Distributed processing with NumPy and Zarr
Hdf5zarr
⭐
5
Reading HDF5 files with Zarr
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