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Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integration Center) to process data. Tibanna supports CWL/WDL (w/ docker), Snakemake (w/ conda) and custom Docker/shell command.

An opinionated Cromwell orchestration manager.

Workflows ⭐ 28

Bioinformatics workflows developed for and used on the St. Jude Cloud project.

Create WDL documentation using Markdown.

[Experimental] Workflow Definition Language (WDL) to CWL

Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources

Fungal Wdl ⭐ 5

Broad fungal method repository

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