Awesome Open Source

Programming Languages

Search results for variants fasta

0 search results found

✂️ ⚡ Rapid haploid variant calling and core genome alignment

Phased assembly variant caller

TIDDIT - structural variant calling

Transanno ⭐ 54

accurate LiftOver tool for new genome assemblies

A program to call variants from genome alignment

Mapcaller ⭐ 32

MapCaller – An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes

Public Health England SNP calling pipeline.

Rsamtools ⭐ 25

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import

Autopvs1 ⭐ 23

An automatic classification tool for PVS1 interpretation of null variants

For original Nature Biotechnology Publication (Q1 2012)

LAVA: Lightweight Assignment of Variant Alleles

Varifier ⭐ 13

Variant call verification

Illumina Array Protocols ⭐ 11

processing illumina SNP arrays

Vbt Trioanalysis ⭐ 10

FLT3 ITD detection (ITDseek) and simulation (ITDsim)

Simulate next-generation sequencing reads for tumor samples

Bioscripts ⭐ 9

Scripts for bioinformatics data processing and analysis

Super Minityper ⭐ 7

Simulator for structural variants in various types of next-generation sequencing data

VAriant Mapping and Prediction of antimicrobial resistance

CoV-Seq: COVID-19 Genomic Sequence Database and Visualization

Readphaser ⭐ 5

experimental read phasing from HapCut

Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning

Convert structural variants to sequence graphs [ VCF + FASTA ---> GFA ]

1-0 of 0 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.