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MiXCR is an ultimate software platform for analysis of Next-Generation Sequencing (NGS) data for immune profiling.

Immunarch ⭐ 256

🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires

Awesome Vdj ⭐ 150

📚 Tools and databases for analyzing HLA and VDJ genes.

Vdjtools ⭐ 113

Post-analysis of immune repertoire sequencing data

HTS-compatible wrapper for IgBlast V-(D)-J mapping tool

The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating from repeat sequences, recombinant B and T cell receptors, and microbial communities.

Splithunter ⭐ 5

Identify split reads in given chromosomal regions

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