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Search results for single cell cancer genomics

cancer-genomics x

6 search results found

Haplotype-aware CNV analysis from single-cell RNA-seq

Identifying tumor cells at the single-cell level using machine learning

Clonealign ⭐ 25

Bayesian inference of clone-specific gene expression estimates by integrating single-cell RNA-seq and single-cell DNA-seq data

Single-cell copy number calling and event history reconstruction.

SCARLET (Single-cell Algorithm for Reconstructing Loss-supported Evolution of Tumors) is an algorithm that reconstructs tumor phylogenies from single-cell DNA sequencing data. SCARLET uses a loss-supported model that constrains mutation losses based on observed copy-number data.

Hgg Oncohistones ⭐ 5

Analysis for "K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas" (Jessa et al, Nature Genetics, 2022)

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