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87 search results found

Modules ⭐ 618

Environment Modules: provides dynamic modification of a user's environment

Hardware locality (hwloc)

Easybuild ⭐ 428

EasyBuild - building software with ease

Slurm_tools ⭐ 350

My tools for the Slurm HPC workload manager

Magpie contains a number of scripts for running Big Data software in HPC environments, including Hadoop and Spark. There is support for Lustre, Slurm, Moab, Torque. LSF, Flux, and more.

Hpc_beginning_workshop ⭐ 126

Scalable High-performance Algorithms and Data-structures

Azurehpc ⭐ 111

This repository provides easy automation scripts for building a HPC environment in Azure. It also includes examples to build e2e environment and run some of the key HPC benchmarks and applications.

Argobots ⭐ 96

Official Argobots Repository

Azhpc Images ⭐ 80

Scripts for installing HPC/AI libraries, and tools used in building Azure HPC/AI images

Build Instructions ⭐ 66

Contains build scripts and instructions for software on a variety of UK HPC resources

1click Hpc ⭐ 56

Deploy your HPC Cluster on AWS in 20min. with just 1-Click.

Fgci Ansible ⭐ 54

🔬 Collection of the Finnish Grid and Cloud Infrastructure Ansible playbooks

Launcher ⭐ 54

A simple utility for executing multiple sequential or multi-threaded applications in a single multi-node batch job

Sheffield_hpc ⭐ 52

Docs for University of Sheffield HPC systems

Port Forwarding Utility

Hpc Tools ⭐ 29

Open_hpc ⭐ 28

Dasandata's Open HPC Cluster Recipes & Document.

Examplejobs ⭐ 28

Example job submission and application scripts for Northwestern's Quest computing cluster

Aws Parallelcluster Monitoring ⭐ 27

Monitoring Dashboard for AWS ParallelCluster

Hpc Stack ⭐ 26

Create a software stack for HPC's

Hpc Submission Scripts ⭐ 26

Example job submission scripts for HPC systems (PBS and SLURM)

A C++ Library for Influence Maximization

ROCm Machine Learning and HPC Stack installer

Scripts to facilitate parallel InSAR processing and analysis of Sentinel-1 time series on HPC clusters based on GMTSAR and Slurm.

Bigcomputelabs ⭐ 20

Big Compute Learning Labs

Python Mpi Bcast ⭐ 20

python start-up, in a HPC friendly manner

PEMA: a flexible Pipeline for Environmental DNA Metabarcoding Analysis of the 16S/18S rRNA, ITS and COI marker genes

Az Hpcapps ⭐ 19

Guidance and framework for running HPC applications on Azure. This is not production ready and should be considered like a sample. NOTE: Please look at https://github.com/Azure/azurehpc as it is the most recent work that the team has published with tools for building HPC infrastructure and most of the applications here and more are integrated there already. You may still refer here as needed but this work is not being actively maintained.

Blas Benchmarks ⭐ 16

Timing results for BLAS (Basic Linear Algebra Subprograms) libraries in R

Shine Cluster ⭐ 15

Simple High performance Infrastructure for Neural network Experiments

Lsf Hybrid Cloud ⭐ 14

This repository contains sample code to help you extend your LSF cluster to the cloud. It provides fully functional examples of how to setup Hybrid LSF clusters on both IBM Cloud and AWS. It includes Resource Connector configuration to allow automatic scaling of the LSF cloud cluster based on the workload demand. Note: This is sample code.

Stackhpc Image Elements ⭐ 14

OpenStack Diskimage Builder elements for HPC

Multi-User Software stack for interactive Machine Learning on HPC-Clusters

Bio Workshop 18 ⭐ 13

Pawsey workshop: containers for bioinformatics

Launcher Scripts ⭐ 13

A set of launcher scripts to be used with OAR for running jobs on the UL HPC platform

Hpc Workshop Wrf ⭐ 13

Speed Hpc ⭐ 13

Speed: Gina Cody School HPC Facility: Scripts, Tools, and Refs

Advanced Command Line ⭐ 13

Software to calculate magnetostriction coefficients and magnetoelastic constants

Install_lammps ⭐ 12

Eurompi2016 ⭐ 12

Presentation for EuroMPI 2016

Setup Mujoco Gym For Drl ⭐ 11

Guide on how to set up openai gym and mujoco for deep reinforcement learning research.

Aws Parallelcluster Post Install Scripts ⭐ 11

Scripts to customize AWS ParallelCluster

Variant Calling Pipeline ⭐ 11

HPC based pipelines for variant calling using GATK

Hpc_r_workshop ⭐ 11

HPC-services user documentation.

Ostack Hpc ⭐ 10

Enables HPC Environment in an OpenStack Cloud

Guppy_on_slurm ⭐ 10

Splitting and accelerating the Oxford Nanopore basecaller guppy using CPU with the SLURM job scheduler

🆓 port4me - Get the Same, Personal, Free TCP Port over and over

Spark On Slurm ⭐ 10

Cyverse Sdk ⭐ 10

A resource for CyVerse developers

Benchmarks ⭐ 10

HPC Benchmarks for most popular applications in Chemistry, Physics, Biology, and some other related subjects

Intro_ml_libs ⭐ 10

Hpc Collab ⭐ 9

This project provides provisioned HPC cluster models using underlying virtualization mechanisms.

Hpc Containers ⭐ 9

You should offer both Podman and Apptainer with name spaces on your HPC systems

Rsmodules ⭐ 9

The RSModules package is a tool to help you to modify your environment by using modulefiles.

Brc Draft Documentation ⭐ 8

A place to contribute edits to documentation for Berkeley Research Computing services (e.g. the Savio HPC cluster, Cloud Consulting Support)

Spark On Hpc ⭐ 8

Docker Ib Mpi ⭐ 8

A hack to make MPI over Infiniband to work on Docker containers

Hpc Infrastructure Scripts ⭐ 8

Scripts used in ILRI's research computing infrastructure

Pangeo Hpc Singularity ⭐ 8

Scripts to run dask and jupyter lab on Singularity using the pangeo-notebook image

Forced Alignment ⭐ 8

GSoC'16 RedHen Labs

A Low-Overhead tool for Floating-Point Exception Detection in NVIDIA GPUs

Clusterware ⭐ 7

Tools and conventions for improving the ease of use of HPC facilities

Singularity On Nomad ⭐ 7

The Singularity on Nomad tutorial documents how to deploy Singularity on Nomad.

My Container Cluster (MCC) is a tool that automates the creation of container based computing clusters (LXD)

Hpc Savio Xsede ⭐ 7

Multicore and multi-node parallel R computation via SLURM on the Savio cluster at UC Berkeley, plus XSEDE

Tigress Scripts ⭐ 7

[Not Current] Setup and Example scripts for R-based HPC at Princeton University

Python Wordcount Hadoop ⭐ 7

Conda Stage ⭐ 6

conda-stage: Stage a Conda Environment on Local Disk

Aws Parallelcluster Price Performance ⭐ 6

This repository complements the AWS white paper on how to achieve optimal price/performance for your HPC workloads.

Ai Workflows ⭐ 6

A collections of portable, real-world AI workflows for testing and benchmarking

Slurmdocker ⭐ 6

A Slurm Docker image for use on AWS and/or locally

Wrf Gc Massively Parallel ⭐ 6

Logs of a massively parallel, thousand-core run of WRF-GC on the AWS Cloud

D interface to libraries for HPC

Clusterdebian ⭐ 6

A Debian-based Linux distro to make HPC on temporary clusters a bit more convenient.

Guides for myself and other, on how some of my stuff is configured.

Flux Coral2 ⭐ 6

Plugins and services for Flux on CORAL2 systems

Container Recipes ⭐ 6

Sanitized mirror of code.ornl.gov private container-recipes

Vsc_ngs_workshop ⭐ 5

This is the repository of the Genomics Core High Performance Computing for Genomics workshop.

Easybuild Singularity Tutorial ⭐ 5

EasyBuild - Singularity tutorial

Spark Hpc ⭐ 5

Runs SPARK applications on a Linux cluster through a PBS batch system.

Bioinfougrp ⭐ 5

OIST Bioinfo user group

Cloud Native_high Performance_computing ⭐ 5

Final Demo: https://www.youtube.com/watch?v=lnEI6LDyfc0&featur

Amazonhpc ⭐ 5

Amazon HPC cluster environment based on StarCluster

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