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Search results for sequencing snakemake

10 search results found

Rna Seq Analysis ⭐ 614

RNAseq analysis notes from Ming Tang

Sunbeam ⭐ 157

A robust, extensible metagenomics pipeline

Sequana ⭐ 136

Sequana: a set of Snakemake NGS pipelines

Seq2science ⭐ 132

Automated and customizable preprocessing of Next-Generation Sequencing data, including full (sc)ATAC-seq, ChIP-seq, and (sc)RNA-seq workflows. Works equally easy with public as local data.

V-pipe is a pipeline designed for analysing NGS data of short viral genomes

Pyflow Chipseq ⭐ 55

a snakemake pipeline to process ChIP-seq files from GEO or in-house

Ngs Pipeline ⭐ 12

Pipeline for Somatic Variant Calling with WES and WGS data

Generate the UMI count matrix from CEL-Seq2 sequencing data

AllMine, a flexible pipeline for Allele Mining. Develloped at INRA's GAFL unit :

A SnakeMake workflow to analyse whole genome bisulfite sequencing data from allopolyploids.

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