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Search results for segmentation microscopy
microscopy
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segmentation
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14 search results found
Cucim
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282
cuCIM - RAPIDS GPU-accelerated image processing library
Pytorch_connectomics
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151
PyTorch Connectomics: segmentation toolbox for EM connectomics
Cloud Volume
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120
Read and write Neuroglancer datasets programmatically.
Axondeepseg
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112
Axon/Myelin segmentation using Deep Learning
Awesome Biological Image Analysis
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74
A curated list of software, tools, pipelines, plugins etc. for image analysis related to biological questions.
Segmentation
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29
Code for my master's thesis. Instance segmentation of fluorescence microscopy images with deep learning.
Symbac
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18
Accurate segmentation of bacterial microscope images using synthetically generated image data.
Biom3d
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15
Easy Volumetric Segmentation with Deep Learning
Exllsm Circuit Reconstruction
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12
Nextflow pipeline encapsulating workflows for analyzing expansion lattice light-sheet microscopy (ExLLSM) imagery
Actk
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11
Automated Cell Toolkit
Zfvascularquantification
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8
#ZVQ - Zebrafish Vascular Quantification - https://doi.org/10.1242/dev.199720
Maskflow Fiji
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8
A Fiji plugin for object detection and tracking based on MaskRCNN.
Ernet
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6
ERNet: Segmentation of Endoplasmic Reticulum microscopy images using modified CNN-based image restoration models.
Anystar
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6
[WACV 2024] Reference implementation of "AnyStar: Domain randomized universal star-convex 3D instance segmentation"
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1-14 of 14 search results
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