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reproducible-paper x

30 search results found

Rrtools ⭐ 619

rrtools: Tools for Writing Reproducible Research in R

papaja (Preparing APA Journal Articles) is an R package that provides document formats to produce complete APA manuscripts from RMarkdown-files (PDF and Word documents) and helper functions that facilitate reporting statistics, tables, and plots.

Nilm Papers With Code ⭐ 119

An archive for NILM papers with source code and other supplemental material

Tcpdbench ⭐ 82

The Turing Change Point Detection Benchmark: An Extensive Benchmark Evaluation of Change Point Detection Algorithms on real-world data

Code for "Depth Uncertainty in Neural Networks" (https://arxiv.org/abs/2006.08437)

Ten Simple Rules Dockerfiles ⭐ 45

Ten Simple Rules for Writing Dockerfiles for Reproducible Data Science

Microbiomehd ⭐ 40

Cross-disease comparison of case-control gut microbiome studies

Computed_manuscript ⭐ 32

A model executable manuscript

Reproducibilty Challenge Ecanet ⭐ 22

Unofficial Implementation of ECANets (CVPR 2020) for the Reproducibility Challenge 2020.

Csv_wrangling ⭐ 19

Repository for reproducibility of the CSV file project

Rrtools.addin ⭐ 17

R Package - A graphical user interface for some of the main functions of Ben Marwick's rrtools package

Mjbtramp ⭐ 17

Topcuoglu_ml_mbio_2020 ⭐ 16

Best practices for applying machine learning to bacterial 16S rRNA gene sequencing data

Baxter_glne007modeling_genomemed_2015 ⭐ 13

Microbiota-based model improves the sensitivity for detecting colonic lesions

1989 Excavation Report Madjedbebe ⭐ 12

Text, data and code to accompany the analysis of the 1989 excavation data

Sze_obesity_mbio_2016 ⭐ 11

Nbreproduce ⭐ 11

Reproduce Jupyter Notebooks inside Docker Containers.

Reproducible Publications With Rstudio ⭐ 9

Introduction to Reproducible Publications with RStudio.

Sclerotinia 366 ⭐ 9

Analysis for "Population structure and phenotypic variation of *Sclerotinia sclerotiorum* from dry bean (*Phaseolus vulgaris*) in the United States"

Kozich_miseqsop_aem_2013 ⭐ 9

Reproducible analysis of sequence analysis on a MiSeq

Hannigan_crcvirome_mbio_2018 ⭐ 8

Investigating the gut virus communities associated with colon cancer.

Reproducible Research Practices Workshop ⭐ 8

Workshop on reproducible research practices for psychologists

Template Computo Quarto ⭐ 7

Template for submitting a manuscript with quarto (Jupyter or Rmarkdown)

Schloss_pacbio16s_peerj_2016 ⭐ 6

Repo for Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system

Arch_uncert ⭐ 6

Code for "Variational Depth Search in ResNets" (https://arxiv.org/abs/2002.02797)

Labelreviews ⭐ 5

Reproducible Label Reviews

Hgg Oncohistones ⭐ 5

Analysis for "K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas" (Jessa et al, Nature Genetics, 2022)

The procedures and a workflow to prepare Student Cluster Competition submissions:

Schloss_pacbio16s_peerj_2015 ⭐ 5

Repository to accompany "Sequencing 16S rRNA gene fragments using the PacBio SMRT DNA sequencing system"

Mjbnaturepaper ⭐ 5

1-30 of 30 search results

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