Awesome Open Source

Programming Languages

Search results for r scrna seq analysis

scrna-seq-analysis x

13 search results found

An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

Supercell ⭐ 44

Coarse-graining of large single-cell RNA-seq data into metacells

Scclustviz ⭐ 42

Explore and share your scRNAseq clustering results

A deep learning-based tool for alignment and integration of single cell genomic data across multiple datasets, species, conditions, batches

Data-driven Network-based Bayesian Inference of Drivers

BITFAM is a Bayesian approach and platform to infer transcription factor activities within individual cells using single cell RNA-sequencing data. Please see Gao S et al., Genome Research (2021) https://genome.cshlp.org/content/31/7/1296 for details.

Cell type matching in single-cell RNA-sequencing data using FR-Match

R package for single-cell RNA-sequencing analysis

Projectsvr ⭐ 9

A package for reference mapping and nice visualization

Pancreas_ductal_scrnaseq ⭐ 9

The following repository contains code for all scRNAseq analysis and visualization performed in the paper: Single cell resolution analysis of the human pancreatic ductal progenitor cell niche

Granular Functional Filtering (Gruffi) to isolate stressed cells

Simple implementation of different single cell RNA-seq methods

Intercellular communication analysis for scRNA-seq data

Related Searches

R Rstats (2,342)

R Rstudio (1,746)

R Dataset (1,483)

Python R (1,449)

R Machine Learning (1,113)

R Visualization (1,019)

R Statistics (971)

1-13 of 13 search results

Privacy | About | Terms | Follow Us On Twitter

Copyright 2018-2024 Awesome Open Source. All rights reserved.