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111 search results found

Rspapers ⭐ 5,701

A Curated List of Must-read Papers on Recommender System.

Rticles ⭐ 1,416

LaTeX Journal Article Templates for R Markdown

Ggpomological ⭐ 305

🍑 Pomological plot theme for ggplot2

Graphlayouts ⭐ 260

new layout algorithms for network visualizations in R

Rentrez ⭐ 149

talk with NCBI entrez using R

Agricultural datasets

Generalisation Humans Dnns ⭐ 95

Data, code & materials from the paper "Generalisation in humans and deep neural networks" (NeurIPS 2018)

Openpolicing ⭐ 86

The Stanford Open Policing Project - https://openpolicing.stanford.edu

Shapforxgboost ⭐ 78

SHAP (SHapley Additive exPlnation) visualization for 'XGBoost' in 'R'

Sensemakr ⭐ 78

Suite of sensitivity analysis tools for OLS

Metadigitise ⭐ 74

Digitising functions in R for extracting data and summary statistics from figures in primary research papers

The Lancet 2018 ⭐ 69

Reproduce "Regional population structures at a glance"

Covid19_cfr_submission ⭐ 69

Repository for all scripts required to replicate the CFR analysis for paper submission.

MSGARCH R Package

stray {Search and TRace AnomalY}. Full paper is available from https://arxiv.org/pdf/1908.04000.pdf 🐶🐶🐶🐶🐱 🐶 🐶🐶🐶🐶

KFAS: R Package for Exponential Family State Space Models

The Panama Papers offshore leaks database in R

Bayes Vis Paper ⭐ 49

'Visualization in Bayesian workflow' by Gabry, Simpson, Vehtari, Betancourt, and Gelman. (JRSS discussion paper and code)

A rmarkdown template to create tutorials/practicals or examination papers.

Data Science And Machine Learning Resources ⭐ 37

List of Data Science and Machine Learning Resource that I frequently use

Experimental design framework for scRNAseq population studies (eQTL and DE)

Nflscrapr Models ⭐ 31

Code to build and test the expected points and win probability models in nflscrapR

Cytometry Clustering Comparison ⭐ 30

R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data

Riskportfolios ⭐ 30

Functions for the construction of risk-based portfolios

Exac_2015 ⭐ 29

Companion repo for ExAC paper, 2015

Sc3 Paper Figures ⭐ 25

Scripts to recreate figures from the SC3 paper

A toolbox for writing Sweave or other LaTeX-based papers and reports and to prettify the output of various estimated models.

Heterogeneity ⭐ 23

Code accompanying Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

COVID-19 Open Research Dataset (work in progress)

DeepLearning using Keras with R

Disprity ⭐ 21

Measuring disparity with R

An R package to compute WAR for offensive players using nflscrapR

stochastic neural networks in R

Bipolarcell2016 ⭐ 19

Clear Sky Models ⭐ 19

A library of clear-sky irradiance models

Single Cell Ko Screens ⭐ 19

Repository containing all code for secondary analysis in the manuscript "On the design of CRISPR-based single cell molecular screens", Hill, McFaline-Figueroa et al.

Blood_rnaseq_rare_disease_paper ⭐ 17

Ai_in_actuarial_science ⭐ 17

Code accompanying the paper "AI in Actuarial Science"

Emnlp_17_submission ⭐ 17

The dataset and statistical analysis code released with the submission of EMNLP 2017 paper "Why We Need New Evaluation Metrics for NLG"

Blm Replicate ⭐ 16

Replication package for Bonhomme Lamadon and Manresa paper, A distributional framework for matched data

Commitmentbank ⭐ 16

Materials related to our Sinn und Bedeutung 23 paper

Splatter Paper ⭐ 15

Data and analysis for the Splatter paper

Retractcheck ⭐ 15

Check DOIs in a paper for retractions.

Paper Tsibble ⭐ 15

A new tidy data structure to support exploration and modeling of temporal data

Eusn Co Citation Networks ⭐ 14

R code to get co-citation networks on social networks in the social sciences vs physics and computer science using Web of Science data.

Gendergapcode ⭐ 14

Code used to extract and analyse gender data from PubMed and arXiv in 2018 PLOS Biol paper

Rspapers ⭐ 14

推荐系统论文

15 Student Papers ⭐ 14

Graphics & computing student paper winners @ JSM 2015

Batchcorrmetabolomics ⭐ 13

Supplementary material for the paper "Improved batch correction in untargeted MS-based metabolomics" by R. Wehrens, et al. Metabolomics, 2016.

Sleuth_paper_analysis ⭐ 13

Code to reproduce analyses from the sleuth paper

Threshold Test ⭐ 12

Testing for racial discrimination in police searches of motor vehicles

Optimization process of WGCNA hierarchical clustering with k-means

Ninja Rs ⭐ 12

An educational implementation of the ninja build system, based on ideas from the Build Systems a la Carte paper.

Retractr ⭐ 12

Open Retractions API client

Garch Rac ⭐ 11

Repository for GARCH tutorial paper in RAC

Culturaltransmissionmodel ⭐ 11

Source codes for the paper "The effect of equilibrium assumptions on reconstructing patterns of cultural transmission from frequency data"

Isdevaluation ⭐ 11

Code to pair with the paper "Effective Ways to Build and Evaluate Individual Survival Distributions".

3d_deeplearning_for_hyperspectral_images ⭐ 11

Models used for our paper submission

Scimeetr ⭐ 11

Scimeetr is an R package, and a shiny app that helps researchers introduce themselves into their scholarly literature. It contains a suit of function that let someone: load bibliometric data into R, make a map of peer reviewed papers by creating various networks, find research community, characterize the research communities, and generate reading list.

Code for the paper 'Variable Selection with Copula Entropy' published on Chinese Journal of Applied Probability and Statistics

Kademlia Dht Rs ⭐ 10

The Self-Updating Process Clustering Algorithms

Neuroexpressoanalysis ⭐ 10

Paper at: http://www.eneuro.org/content/4/6/ENEURO.0212-17.2

Zinb_analysis ⭐ 10

Data analysis and simulations for the ZINB-WaVE paper

Dietdatabase ⭐ 10

Regression Paper ⭐ 10

Code and data for paper on regression with survey data

Materials accompanying the upstrap paper

Dom_adapt ⭐ 9

Code for the NIPS 2018 paper "Domain Adaptation by Using Causal Inference to Predict Invariant Conditional Distributions"

Funnorm_repro ⭐ 9

Funnorm reproducible analysis

Pvaluefunctions ⭐ 9

Repository for the 'pvaluefunctions R package

Nonlineardotplots ⭐ 9

Implementation of the algorithm described in the paper "Nonlinear Dot Plots" by Nils Rodrigues and Daniel Weiskopf

Sckidneytumors ⭐ 9

Code for "Single cell transcriptomes from human kidneys reveal the cellular identity of renal tumours"

Helpers for literature management as GitHub actions

Hitler Speeches ⭐ 9

Supplementary and replication materials for paper "Examining a Most Likely Case for Strong Campaign Effects: Hitler's Speeches and the Rise of the Nazi Party, 1927-1933"

R Code recipes for Functional Data Analysis for phonetic analysis.

Nativernaseqcomplextranscriptome ⭐ 9

Code for the paper "A comprehensive examination of Nanopore native RNA sequencing for characterization of complex transcriptomes"

Meeting of some friends to discuss methods, philosophy, stats, psychology and surrounding topics.

Chronnets ⭐ 8

A network-based model for spatiotemporal data analysis

Damage_repair ⭐ 8

Genome-wide DNA damage and excision repair maps

Ranzani_bastos_etal_lrm_covid19brazil ⭐ 8

Data and code for the paper "Characterizing the first 250,000 adult hospitalisations for COVID-19 in Brazil: a nationwide study"

Europe_selection ⭐ 8

Analysis scripts from the paper "Eight thousand years of natural selection in Europe".

Admixture_in_africa ⭐ 8

analysis and plotting code for "Admixture into and within Africa" by George Busby et al 2016 (eLife)

Twitter Incivility ⭐ 8

Replication materials for the paper "A Bad Workman Blames His Tweets. The Consequences of Citizens' Uncivil Twitter Use when Interacting with Party Candidates"

Taxi Demand Prediction ⭐ 8

This repository contains the code and hyper-parameters for the paper: "Predicting taxi-passenger demand using streaming data, L. Moreira-Matias, J. Gama, M. Ferreira, J. Mendes-Moreira, and L. Damas, IEEE Transactions on Intelligent Transportation Systems 14 (2013), no. 3, 1393–1402” Please cite this paper if you use the code in this repository as part of a published research project.

Helping.funders ⭐ 7

Helping funders and researchers by creating a list of a researcher's (or groups of researchers') publication output from an ORCID ID

Datasets and source code for reproducing the paper 'Integrating multiple evidence sources to predict adverse drug reactions based on systems pharmacology model'.

Driver Analysis ⭐ 7

Workflow for driver events identification across cohorts of tumours

Copulastatistic ⭐ 7

All code related to the paper: "A Copula Statistic for Measuring Nonlinear Multivariate Dependence"

Onlinesuperlearner ⭐ 7

Onekp Gene Family Evo ⭐ 7

Gene family evolution analysis of OneKP capstone paper

Multielectrode array analysis in R

The Gap Statistic ⭐ 7

An implementation of the gap statistic, a method for estimating the number of clusters in a set of data.

Burstanalysis ⭐ 7

Resources for burst analysis paper

Canyon Med ⭐ 7

CANYON-MED codes and training weights

Dejavu Artifact ⭐ 7

Artifact for the OOPSLA 17 DejaVu Paper

Piratings ⭐ 7

mirror for the R package "piratings" https://cran.r-project.org/web/packages/piratings/ calculate dynamic performance ratings for association football teams based on the paper of Constantinou and Fenton which can be found [here] (http://www.constantinou.info/downloads/papers/pi-

Restaurant ⭐ 7

Data and code for paper 'Predicting neighborhoods' socioeconomic attributes using restaurant data' (PNAS)

Partially Synthetic Data Generation for Recommender systems

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