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2 search results found
Mlr
⭐
1,609
Machine Learning in R
Yardstick
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354
Tidy methods for measuring model performance
Change Detection Review
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352
A review of change detection methods, including codes and open data sets for deep learning. From paper: change detection based on artificial intelligence: state-of-the-art and challenges.
Bayesab
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278
🐢 bayesAB: Fast Bayesian Methods for A/B Testing
Broom.mixed
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219
tidy methods for mixed models in R
Statistical Learning
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206
Lecture Slides and R Sessions for Trevor Hastie and Rob Tibshinari's "Statistical Learning" Stanford course
Enrichplot
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197
Visualization of Functional Enrichment Result
Dynbenchmark
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167
Comparison of methods for trajectory inference on single-cell data 🥇
Xcms
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160
This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis
Nimble
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142
The base NIMBLE package for R
Sp
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123
Classes and methods for spatial data
Printr
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119
Some (magical) printing methods for knitr
Scdblfinder
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118
Methods for detecting doublets in single-cell sequencing data
Dynmethods
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107
A collection of 50+ trajectory inference methods within a common interface 📥📤
Ggvegan
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101
ggplot-based plots for vegan
Nmf
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94
NMF: A Flexible R package for Nonnegative Matrix Factorization
Scatac Benchmarking
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92
Benchmarking computational single cell ATAC-seq methods
Metrics Guice
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87
Metrics Guice Support
Distributional
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86
Vectorised distributions for R
Rastervis
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83
The raster package defines classes and methods for spatial raster data access and manipulation. The rasterVis package complements raster providing a set of methods for enhanced visualization and interaction.
Prediction
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78
Tidy, Type-Safe 'prediction()' Methods
Spacetime
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69
Classes and methods for spatio-temporal data
Generics
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60
Common generic methods
Dynverse
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58
A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍
Rexrepos
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56
R Examples Repository
Ggord
⭐
55
a take on ordination plots using ggplot2
Stackr
⭐
55
R package for connecting to the Stack Exchange API
Biobroom
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47
Tidy up computational biology objects
Mlr3spatiotempcv
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47
Spatiotemporal resampling methods for mlr3
Mlr3tuning
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46
Hyperparameter optimization package of the mlr3 ecosystem
Spatialreg
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40
spatialreg: spatial models estimation and testing
Datest
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34
Compare different differential abundance and expression methods
Hanhan_data_science_resources
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33
helpful resources for (big) data science
Sinkr
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32
A collection of functions with emphasis on multivariate methods and handling of geographic datasets
Tempdisagg
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32
Methods for Temporal Disaggregation and Interpolation of Time Series
Cytometry Clustering Comparison
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30
R scripts to reproduce analyses in our paper comparing clustering methods for high-dimensional cytometry data
R62s3
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28
Automatic conversion of R6 public methods to S3 and S4 methods and functions.
Migest
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27
Tools for estimating, measuring and working with migration data.
Plotkml
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24
plotKML: Visualization of Spatial and Spatio-Temporal Objects in Google Earth
Scicom
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24
Scientific Computing for JRuby
Cellbench
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23
R package for benchmarking single cell analysis methods
Spatialepi
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22
R Package of methods and data for spatial epidemiology
R Exasol
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22
The EXASOL package for R provides an interface to the EXASOL database.
Latrend
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22
An R package for clustering longitudinal datasets in a standardized way, providing interfaces to various R packages for longitudinal clustering, and facilitating the rapid implementation and evaluation of new methods
Utiml
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21
Utilities for multi-label learning
Satellite
⭐
20
Class and preprocessing methods for (satellite) remote sensing datasets
Nbzimm
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20
NBZIMM (Negative Binomial and Zero-Inflated Mixed Models)
D3plusr
⭐
17
A package for D3plus in R
Summarizedbenchmark
⭐
16
SummarizedBenchmark defines a flexible framework for benchmarking computational methods in R.
Fma
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16
Data sets from "Forecasting: methods and applications" by Makridakis, Wheelwright & Hyndman (1998)
Waypointer
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16
Waypoints & Animations for Shiny
Betfair
⭐
16
R package for the Betfair API
Geiger V2
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15
A suite of methods and models for studying evolutionary radiations
Plumbr
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15
Mutable dynamic data structures for R
Phd
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14
PhD Thesis: Sentiment Analysis-Based Methods for Cultural Monuments
Ordination101
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14
Ordination lectures for Ecological Methods in Oulu
Scry
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14
Collection of analysis methods for small count data generated by rafalab members (the methods, not the data).
Mlforforecasting
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13
Machine Learning vs Statistical Methods for Time Series Forecasting: Size Matters
Plsmod
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13
Model Wrappers for Projection Methods
Icobra
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13
Interactive benchmarking of ranking and assignment methods
Gseabenchmarker
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13
Reproducible GSEA Benchmarking
Networktoolbox
⭐
13
Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis
Linkprediction
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12
R package for proximity-based methods of link prediction.
Abrupt
⭐
12
Methods for detecting abrupt change in temporal, spatial, and spatiotemporal data series
Imputationbenchmark
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12
benchmark for single-cell RNA-seq imputation methods
Weibulltools
⭐
11
Statistical methods and visualizations often used in reliability engineering including the well-known weibull analysis and Monte Carlo simulations
Cyclingpotential Hack
⭐
11
Cycling Potential Hackathon repo
Stranger
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11
R Package: Simple Toolkit in R for ANomaly Get, Explain and Report
Deductive
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10
Methods for deductive data correction and imputation
Simmer.plot
⭐
10
Plotting Methods for 'simmer'
Msimpute
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10
Methods for label-free mass spectrometry proteomics
Pvm
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9
A collection of signal detection methods used in the field of pharmacovigilance
Surveybootstrap
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9
bootstrap methods for survey data in R
Ggcmi
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9
GGCMI codes
Text_mining_with_r
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9
A collection of scripts for teaching and learning basic text mining methods in R
Rbasex
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9
Coranking
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8
Co-Ranking matrix and derived methods to assess the quality of dimensionality reductions
Eems Around The World
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8
Repo to analyze population genetic data with many different methods
Which_tree
⭐
8
Testing of phylogenetic inference methods
Msdm
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8
Methods to deal with overprediction of species distribution models
Sensiphy
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8
R package to perform sensitivity analysis for comparative methods
Plotting_tree_with_data
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8
Two methods for mapping and visualizing associated data on phylogeny using ggtree
Archive Singlecellexperiment
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8
This is the archived version of SingleCellExperiment with the history before Bioc submission.
Bootstraprisk
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7
Backtesting Bootstrap Value-at-Risk and Expected Shortfall estimates in GARCH models (Master Dissertation)
Batchman
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7
A wrapper for R methods to run them in arbitrary batches.
Dclone
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7
Data Cloning and MCMC Tools for Maximum Likelihood Methods
Mqmf
⭐
7
An R package to accompany the new book 'Using R for Modelling and Quantitative Methods in Fisheries'
Sizespectra
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7
R package for fitting size spectra to ecological data (including binned data)
S4coffee
⭐
7
S4Coffee is a roxygen-like framework for declaring classes, generics, and methods for the S4 object system in R via comments and then automatically generating the code that implements them.
Managing_batch_effects
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7
Tactile
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7
New and Extended Plots, Methods, and Panel Functions for Lattice
Lasforecast
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7
Time series forecasting with Lasso-type shrinkage methods
Migest
⭐
7
❗ This is a read-only mirror of the CRAN R package migest — Methods for the Indirect Estimation of Bi Report bugs for this package: https://github.com/g
Methodevaluation
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6
An R package for the evaluation of estimation methods
Fdagstat
⭐
6
An R package that implements the methods of geostatistics for functional data
Nitinol Design Concepts
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6
Nitinol design concepts and examples from Confluent Medical Technologies
Multitable_review
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6
Code to accompany "Multitable Methods for Microbiome Data Integration"
Mvnweb
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6
a web-tool for assessing multivariate normality
Rquery
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6
Bringing the `jQuery` syntax to R
G2p
⭐
6
G2P is an integrated genomic selection (GS) package for predicting phenotypes from genotypes. It includes 15 GS algorithms and 13 evaluation measurements.
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