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Search results for r matrices
matrices
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80 search results found
Recipes
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521
Pipeable steps for feature engineering and data preprocessing to prepare for modeling
Matrixstats
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187
R package: Methods that Apply to Rows and Columns of Matrices (and to Vectors)
Bigstatsr
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165
R package for statistical tools with big matrices stored on disk.
Emphatic
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89
ANSI colouring of R output
Velocyto.r
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83
RNA velocity estimation in R
Hdl
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78
High-definition likelihood inference of genetic correlations (HDL)
Seriation
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71
Infrastructure for Ordering using Seriation - R Package
Machineshop
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62
MachineShop: R package of models and tools for machine learning
Pairsd3
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53
D3 scatterplot matrices
Nnlm
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53
Nonnegative Linear Models (NNLM) and Nonnegative Matrix Factorization (NMF or NNMF).
Sparsematrixstats
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51
Implementation of the matrixStats API for sparse matrices
Rarpack
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45
Solvers for Large Scale Eigenvalue and SVD Problems
Float
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44
Single precision (float) matrices for R.
Paralleldist
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41
R Package: Parallel Distance Matrix Computation using Multiple Threads
Machine Learning
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35
🌎 I created this repository for educational purposes. It will host a number of projects as part of the process .
Synthetic Contact Matrices
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32
Updates to the synthetic contact matrices
Spatialcluster
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31
spatially-constrained clustering in R
Bgdata
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30
A Suite of Packages for Analysis of Big Genomic Data
Countsimqc
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27
countsimQC - Compare characteristic features of count data sets
Proxyc
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27
R package for large-scale similarity/distance computation
Rcppcnpy
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26
Rcpp bindings for NumPy files
Immunespacer
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25
An R Interface to the ImmuneSpace database portal
Letsr
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23
Tools for data handling and analysis in macroecology
Corrmorant
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21
R package for flexible correlation matrices based on ggplot2
Rstudio Addin Snippets
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19
RStudio add-in to copy data to clipboard, reverse slashes, insert and reformat pipes.
Sigprofilermatrixgeneratorr
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17
R wrapper for utilizing the SigProfilerMatrixGenerator framework
Resemble
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17
resemble is an R package which implements functions dedicated to non-linear modelling of complex spectroscopy data
Mat
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15
R demo package illustrating BLAS and LAPACK calls in C called from R
Hypr
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15
hypr is an R package for easy translation between experimental (null) hypotheses and contrast matrices as used for linear regression.
Proj
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15
Straightforward R wrapper for the PROJ library (>=6)
Radiomics
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15
A toolkit for the calculation of radiomics features in R.
Tadcompare
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15
Package for analysis and characterization of differential TADs
Scchipseq
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15
Analysis of single-cell ChIP-seq datasets : From count matrices to differential analysis
Lfa
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15
logistic factor analysis
Nadiv
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14
R package that constructs (non)additive genetic relationship matrices, and their inverses, from a pedigree to be used in linear mixed effect models (A.K.A. the 'animal model').
Chromscape
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13
ChromSCape
Pbdml
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13
Spark
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13
Sparklines in the R terminal
Panvizgenerator
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12
Create your own PanViz visualizations
Funrar
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12
📦 R package to compute functional rarity indices (functional distinctiveness, uniqueness, restrictedness, scarcity)
Rasterdiv
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12
Diversity Indices for Numerical Matrices
Netmem
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11
'netmem: Network Measures using Matrices' is an R Package
Glcm
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11
Calculate textures from grey-level co-occurrence matrices (GLCMs) in R
Hiccompare
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11
Joint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the analysis of multiple Hi-C matrices
Rcompadre
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11
R tools for obtaining and manupulating data from the COMPADRE and COMADRE Plant and Animal Matrix Databases
Aghmatrix
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11
An R package to compute relationship matrices for diploid and autotetraploid species
Sccore
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10
Core utilities for single-cell RNA-seq
Heplots
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9
Visualizing Hypothesis Tests in Multivariate Linear Models, http://friendly.github.io/heplots/
Bratwurst
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8
R package for wrapper functions, preprocessing, NMF and postprocessing
Letsr
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8
Package letsR
Sparsevar
⭐
8
R package for sparse VAR estimation
Efficient Columnwise Correlation
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7
Efficient ways to compute Pearson's correlation between columns of two matrices in various scientific computing languages
Dismay
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7
Calculation of distance metrics for matrices
Rags2ridges
⭐
7
Get ridge or die trying - 2 cents
Greta.dynamics
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7
a greta extension for modelling dynamical systems
Funtoonorm
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6
Methylumi
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6
Spectraltad
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6
TAD Calling using spectral clustering in R
Protein Edm Demo
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6
🔢🔀 Protein structure modelling using Euclidean distance matrices (EDMs)
Tadpole
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6
TADpole is a computational tool designed to identify and analyze the entire hierarchy of topologically associated domains (TADs) in intra-chromosomal interaction matrices. This is the development version of TADpole. You can find the stable version at
Sled
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6
An R package for testing high-dimensional covariance matrices
Phylter
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6
Detection of outlier genes and species in phylogenomics
Introductory_maths
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6
A repository of tutorials to revise mathematical concepts required for statistics and machine learning
Fastpca
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6
FastPCA using PRIMME
Genogam
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6
Activeh5
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6
Tadpole
⭐
5
TADpole is a computational tool designed to identify and analyze the entire hierarchy of topologically associated domains (TADs) in intra-chromosomal interaction matrices. This is the stable version of TADpole. You can find the development version at
Tfrecords
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5
Create TFRecords files from R
Metaaidr
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5
Functions for aiding meta-analyses in Ecology, Evolution and beyond
Filematrix
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5
R package for handling big file-stored matrices
Comat
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5
Create co-occurrence matrices based on spatial data
Pdist
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5
Distance functions on subsets of matrices
Hbef
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5
Hierarchical Bayes Ensemble Kalman Filter
Lauraeds
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5
Laurae's Data Science R Package
Mmapcharr
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5
Memory-map text files of characters as R matrices
100dayscode
⭐
5
Arquivos do Desafio 100 dias de código
Popdemo
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5
R Package for Demographic Modelling Using Projection Matrices
Rphenoscape
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5
R package to make phenotypic traits from the Phenoscape Knowledgebase available from within R.
Quantum
⭐
5
Data Science and Cryptography, at a quantum level
R I Basics
⭐
5
Getting started with using R more intently.
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