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Fishplot
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155
Create timecourse "fish plots" that show changes in the clonal architecture of tumors
Fishualize
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141
The fishualize package provides color scales and silhouettes for plotting in R based on nature’s most stunning and colorful organisms: teleost fishes (with a few chondrichthyan cameos).
Powerline Rs
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106
GitLab: https://gitlab.com/jD91mZM2/powerline-rs
Rfishbase
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98
R interface to the fishbase.org database
Fsa
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63
FSA (Fisheries Stock Assessment) package provides R functions to conduct typical introductory fisheries analyses.
Oddstream
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46
oddstream {Outlier Detection in Data STREAMs} 🐟 🐟 🐟 🐟 🐠 🐟 🐟 🐟 🐟 🐟 🐟 🐟 🐟 🐟🐟
Mizer
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33
Multi-species size-based ecological modelling in R
Rtrees
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24
rtrees: an R package to assemble phylogenetic trees from mega-trees
Worrms
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18
World Register of Marine Species R client
Tropfishr
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17
Tropical Fisheries Analysis with R
Tasic2018analysis
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15
Scripts related to VISp and ALM scRNA-seq and FISH analysis for Tasic, et al., 2018.
Yaps
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15
YAPS - Yet Another Positioning Solver
Fishdata
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14
Compile and harmonize catch rates from fishery-independent surveys of fish populations
Rfishbc
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13
This package helps fisheries scientists collect growth data from calcified structures and back-calculate estimated lengths at previous ages. The package is intended to replace much of the functionality provided by the now out-dated fishBC software.
Fb4
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12
Fish Bioenergetics Model 4
Nlexperiment
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12
🐟 R package for NetLogo experiments http://bergant.github.io/nlexperiment/
Respr
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11
respR - Analyse, convert, and automate respirometry-related and time-series data
Fsadata
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11
FSAdata contains data for use in common fisheries stock analyses. See installation instructions further below.
Biomontools
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10
Tools for biomonitoring and bioassessment; metric calculation for benthic macroinvertebrates, fish, and periphyton.
Isofishr
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10
Strontium isotope laser data reduction in R
Mermaidr
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9
R package for accessing MERMAID authenticated API endpoints
Fishpals
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9
A package to generate fish color palettes
Fishtree
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9
The R interface to the Fish Tree of Life
Aspe
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9
aspe: An R Package to Analyse and Visualise River Fish Data in France
Envdatasci
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7
Course materials for "Intro to Environmental Data Science" offered during Winter 2020 in the UW School of Aquatic and Fishery Sciences
Rfishprod
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7
Ypr
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6
An R package of equilibrium-based yield per recruit methods
Dynamic Stability
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6
Source scripts for Ushio et al. "Fluctuating interaction network and time-varying stability of a natural fish community"
S6model
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6
Data-poor fish stock assessment using the single species, size structured, steady state model
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