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17 search results found
Wtdbg2
⭐
401
Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly
Zumis
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232
zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
Genomics
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154
A collection of scripts and notes related to genomics and bioinformatics
Scatac Pro
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64
A comprehensive tool for processing, analyzing and visulizing single cell chromatin accessibility sequencing data
Fastqcr
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57
fastqcr: Quality Control of Sequencing Data
Bcbiosinglecell
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29
R package for bcbio single-cell RNA-seq analysis.
Rna Seq Snakemake
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20
Snakemake based pipeline for RNA-Seq analysis
Dimsum
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18
An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies
Scfetch
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17
Access and Format Single-cell RNA-seq Datasets from Public Resources
Pipe4c
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17
4C-seq processing pipeline
Rnaseq
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13
RNA-seq, QC and differential analysis pipeline
Pore Cupine
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11
First version of PORE-cupine. Detecting SHAPE modification using direct RNA sequencing
Imonitor
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11
This script use to analyze the immune repertoire sequenced by high throughtput sequencing
Rnaseq
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10
Deprecated, see https://labsyspharm.github.io/rnaseq/
Dekupl Run
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9
Identify differentially expressed k-mers between RNA-Seq datasets
Sradb App
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8
Server and UI files for SRAdp WebApp
Rnaseqdepipeline
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6
RNA-Seq differential gene expression pipeline
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1-17 of 17 search results
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