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Search results for r evolution
evolution
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51 search results found
Oce
⭐
137
R package for oceanographic processing
Clonevol
⭐
87
Inferring and visualizing clonal evolution in multi-sample cancer sequencing
Transphylo
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55
Reconstruction of transmission trees using genomic data
Plant
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51
Trait-Driven Models of Ecology and Evolution 🌲
Mytai
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33
Evolutionary Transcriptomics with R
Ltrpred
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31
De novo annotation of young retrotransposons
Shinymons
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27
shiny app for pokemons
Gramevol
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27
Grammatical Evolution for R
Phylolm
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26
Meskit
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26
A tool kit for dissecting cancer evolution from multi-region derived tumor biopsies via somatic mutations
R Package
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24
Repository of the R-packageGen3sis
Tergm
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22
Fit, Simulate and Diagnose Models for Network Evolution Based on Exponential-Family Random Graph Models
Coala
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21
A Framework for Coalescent Simulation in R
Covid19
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17
Evolution of deaths by covid19 since the first death and some simulations (Evolução do número de mortos por Covid19 desde o primeiro morto e algumas simulações)
R Fieldspectra
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17
R library for importing and processing field spectroscopy data collected with ASD and Spectral Evolution instruments
Phylosim
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16
An R package for the Monte Carlo simulation of sequence evolution
Phylocomr
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15
Phylocom R interface
Geiger V2
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15
A suite of methods and models for studying evolutionary radiations
L1ou
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15
Detection of evolutionary shifts in Ornstein-Uhlenbeck models
Phyloregion
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14
Biogeographic regionalization and spatial conservation
Nichevol
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14
Tools for ecological niche evolution assessment considering uncertainty
Evoarchdata
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12
Datasets from studies of cultural evolution in Archaeology
Lace
⭐
11
LACE 2.0 is a new release of the LACE R Bioconductor package, which provides an interactive user interface to perform clonal evolution analyses for single-cell sequencing data, including longitudinal experiments. The tool also allows to annotate and retrieve the relevant variants based on user-defined criteria.
Treeexp
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11
TreeExp 2.0: Toolbox for analyzing expression evolution based on RNA-seq count data
Datelife
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11
R package containing datelife's core functionality
Differential Evolution Rs
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10
Generic Differential Evolution for Rust
Signatselect
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10
signatselect: Identifying signatures of selection
Sim.glmm
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9
R function to simulate from generalized linear mixed model (GLMM)
Ancetran
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9
AnceTran2.0: R package for transcriptome evolution analysis based on RNA-seq expression data or ChIP-seq TF-binding data
Semeff
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9
Automatic Calculation of Effects for Piecewise Structural Equation Models
Neutralitytestr
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8
Testing a neutral evolution model on cancer sequencing data
Treebase
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8
An R interface to the treeBASE API (now on CRAN)
Sensiphy
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8
R package to perform sensitivity analysis for comparative methods
Course R Mol Data
⭐
8
R is nowadays probably the most powerful tool for calculations of all kinds. There are plenty of modules available for work with molecular data. Those will be introduced during the course.
Cultevo
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8
Measures and statistical tests for cultural evolution in R
Free
⭐
7
Function Regression in Ecology and Evolution
Onekp Gene Family Evo
⭐
7
Gene family evolution analysis of OneKP capstone paper
Ohlohanalytics
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7
A research project studying the code evolution of open source projects using the Ohloh data
Ego Evolution
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6
Evolution of ego-centered community structure using temporal personalised pagerank
Z80 Sdk
⭐
6
SDK for Z80
Verso
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6
Viral Evolution ReconStructiOn (VERSO). The manuscript of the method is available at: https://www.cell.com/patterns/fulltext/S2666-3899(
Pitchquality
⭐
6
The evolution of my pitch quality metric "xRV"
Pulsr
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6
R code for simulating and fitting models of punctuated evolution
Acoustic Telemetry Detection Range Method
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6
Brownscombe et al. "A practical method to account for variation in detection range in acoustic telemetry arrays to accurately quantify the spatial ecology of aquatic animals" Methods in Ecology and Evolution
Treeman
⭐
6
🌳👨 An R package for manipulating phylogentic trees
Cmaesr
⭐
5
Covariance Matrix Adaption - Evolutionary Strategy in R.
Hesaba.covid
⭐
5
Biome_specific_predictability
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5
Calculating temperature and precipitation predictability at the global scale
Scistreer
⭐
5
R/Rcpp implementation of the ScisTree algorithm
Recenthgt
⭐
5
A novel bioinformatics pipeline for recent horizontal gene transfer detecting.
Coelacanthevolution
⭐
5
Analyses of coelacanth morphometrics, disparity, phylogeny, and rate of evolution
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1-51 of 51 search results
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